MGE detailed information
MGE type: Genomic_island MGE length: 45773 bp
Accession: NZ_CP038505 Location: 4785739..4831511 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Accession: NZ_CP038505 Location: 4785739..4831511 Organism: Escherichia coli strain 28Eco12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DC440_RS23745 () | 4781258..4782454 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| DC440_RS23750 () | 4782739..4783020 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| DC440_RS23755 () | 4783042..4783827 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| DC440_RS23760 () | 4783888..4785405 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| DC440_RS23765 () | 4785429..4785728 | + | 300 | WP_033559819.1 | propanediol utilization system shell hexameric protein GrpK | - |
| DC440_RS23770 () | 4785739..4786314 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| DC440_RS23775 () | 4786363..4788915 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| DC440_RS23780 () | 4789024..4789941 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| DC440_RS23785 () | 4790078..4790983 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| DC440_RS23795 () | 4791595..4791964 | + | 370 | Protein_4547 | reverse transcriptase/maturase | - |
| DC440_RS23800 () | 4791964..4792557 | + | 594 | Protein_4548 | maturase | - |
| DC440_RS23810 () | 4793107..4794369 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| DC440_RS23815 () | 4794386..4795441 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| DC440_RS23820 () | 4795570..4796721 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| DC440_RS23825 () | 4796766..4797311 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| DC440_RS23830 () | 4797668..4797961 | - | 294 | Protein_4553 | helix-turn-helix domain-containing protein | - |
| DC440_RS23835 () | 4797984..4798634 | - | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| DC440_RS23840 () | 4798755..4799912 | - | 1158 | Protein_4555 | Multidrug resistance protein MdtB | VF |
| DC440_RS23845 () | 4800003..4800269 | + | 267 | Protein_4556 | IS3 family transposase IS2 | Transposase |
| DC440_RS23850 () | 4800331..4800556 | - | 226 | Protein_4557 | hypothetical protein | - |
| DC440_RS23855 () | 4800568..4800801 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| DC440_RS23860 () | 4800870..4801445 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| DC440_RS23865 () | 4801703..4802269 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| DC440_RS23870 () | 4803570..4804664 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| DC440_RS23875 () | 4804683..4805933 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| DC440_RS23880 () | 4806017..4806952 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| DC440_RS23885 () | 4806945..4807880 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| DC440_RS23890 () | 4808416..4808868 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| DC440_RS23900 () | 4809389..4810120 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| DC440_RS23910 () | 4810790..4811320 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| DC440_RS23915 () | 4812483..4813706 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| DC440_RS23925 () | 4813807..4814691 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| DC440_RS23930 () | 4814894..4815574 | + | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| DC440_RS23935 () | 4815722..4816399 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| DC440_RS23940 () | 4816405..4816638 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| DC440_RS23945 () | 4816728..4817546 | + | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| DC440_RS23950 () | 4817812..4818291 | + | 480 | WP_057109541.1 | antirestriction protein | - |
| DC440_RS23955 () | 4818307..4818783 | + | 477 | WP_001186774.1 | RadC family protein | - |
| DC440_RS23960 () | 4818846..4819067 | + | 222 | WP_000692341.1 | DUF987 domain-containing protein | - |
| DC440_RS23965 () | 4819230..4819598 | + | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DC440_RS23970 () | 4819688..4820062 | + | 375 | WP_000854765.1 | TA system toxin CbtA family protein | Toxin Detail |
| DC440_RS23975 () | 4820062..4820265 | + | 204 | WP_001398797.1 | hypothetical protein | - |
| DC440_RS23980 () | 4820290..4820484 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| DC440_RS23985 () | 4820569..4821411 | + | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| DC440_RS23990 () | 4822160..4823698 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DC440_RS23995 () | 4824064..4825398 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DC440_RS24000 () | 4825478..4827625 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| DC440_RS24005 () | 4827684..4829141 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| DC440_RS24010 () | 4829378..4830895 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| DC440_RS24015 () | 4831014..4831187 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DC440_RS24020 () | 4831215..4831511 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DC440_RS24025 () | 4831740..4832012 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DC440_RS24030 () | 4832024..4832254 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| DC440_RS24035 () | 4832434..4834065 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| DC440_RS24040 () | 4834062..4834781 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|