MGE detailed information
MGE type: Prophage MGE length: 21202 bp
Accession: NZ_CP038499 Location: 448460..469661 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Accession: NZ_CP038499 Location: 448460..469661 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4659_RS02005 (E4659_02015) | 443952..445460 | - | 1509 | WP_024104345.1 | leucyl aminopeptidase | - |
| E4659_RS02010 (E4659_02020) | 445744..446862 | + | 1119 | WP_024104346.1 | LPS export ABC transporter permease LptF | - |
| E4659_RS02015 (E4659_02025) | 446864..447934 | + | 1071 | WP_024104347.1 | LPS export ABC transporter permease LptG | - |
| E4659_RS02025 (E4659_02035) | 448460..449728 | + | 1269 | WP_024104348.1 | hypothetical protein ; Integrase | Integrase |
| E4659_RS02030 (E4659_02040) | 449828..451045 | + | 1218 | WP_024104349.1 | dNTP triphosphohydrolase | - |
| E4659_RS02035 (E4659_02045) | 451089..452717 | + | 1629 | WP_024104350.1 | TIGR04141 family sporadically distributed protein | - |
| E4659_RS02040 (E4659_02050) | 452849..453064 | - | 216 | WP_046830366.1 | helix-turn-helix transcriptional regulator | - |
| E4659_RS02045 (E4659_02055) | 453160..453426 | + | 267 | WP_015848023.1 | helix-turn-helix transcriptional regulator | - |
| E4659_RS02050 | 453649..454743 | - | 1095 | WP_029729226.1 | helicase RepA family protein | - |
| E4659_RS02055 | 454852..455694 | - | 843 | Protein_397 | primase-helicase zinc-binding domain-containing protein | - |
| E4659_RS02060 | 455687..455863 | - | 177 | WP_024104353.1 | hypothetical protein | - |
| E4659_RS02065 | 455945..456223 | - | 279 | Protein_399 | ash family protein | - |
| E4659_RS02070 (E4659_02070) | 456220..456420 | - | 201 | WP_024104354.1 | AlpA family transcriptional regulator | - |
| E4659_RS02075 (E4659_02075) | 456423..457304 | - | 882 | WP_024104355.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E4659_RS02080 (E4659_02085) | 458327..458686 | + | 360 | WP_024104356.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E4659_RS02085 (E4659_02090) | 458670..458993 | + | 324 | WP_024104357.1 | DNA-binding transcriptional regulator | - |
| E4659_RS02090 (E4659_02095) | 459289..460551 | + | 1263 | WP_024104358.1 | AAA family ATPase | - |
| E4659_RS02095 (E4659_02100) | 460551..461180 | + | 630 | WP_024104359.1 | DUF4276 family protein | - |
| E4659_RS02100 (E4659_02105) | 462105..462425 | + | 321 | WP_024104360.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E4659_RS02105 (E4659_02110) | 462415..462699 | + | 285 | WP_024104361.1 | helix-turn-helix transcriptional regulator | - |
| E4659_RS02110 (E4659_02115) | 462706..462852 | + | 147 | Protein_408 | transcriptional regulator | - |
| E4659_RS02115 (E4659_02120) | 462997..463398 | - | 402 | WP_024104362.1 | hypothetical protein | - |
| E4659_RS02120 (E4659_02125) | 463427..463906 | - | 480 | WP_013316117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| E4659_RS02125 (E4659_02130) | 463897..464169 | - | 273 | WP_024104363.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| E4659_RS02130 (E4659_02135) | 464659..465082 | + | 424 | Protein_412 | Arm DNA-binding domain-containing protein | - |
| E4659_RS02140 (E4659_02145) | 466005..466211 | - | 207 | Protein_414 | DUF1778 domain-containing protein | - |
| E4659_RS02145 | 466282..466350 | + | 69 | Protein_415 | integrase | - |
| E4659_RS02150 (E4659_02150) | 466375..466467 | + | 93 | Protein_416 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| E4659_RS02155 (E4659_02155) | 466509..467897 | + | 1389 | WP_024108132.1 | hypothetical protein | - |
| E4659_RS02160 (E4659_02160) | 468047..468385 | - | 339 | WP_024104367.1 | hypothetical protein | - |
| E4659_RS02165 (E4659_02165) | 468858..469661 | + | 804 | WP_024108133.1 | hypothetical protein | - |
| E4659_RS02170 (E4659_02170) | 469751..470377 | - | 627 | WP_024104369.1 | LysE/ArgO family amino acid transporter | - |
| E4659_RS02175 (E4659_02175) | 470574..471056 | - | 483 | WP_024104370.1 | DNA mismatch endonuclease Vsr | - |
| E4659_RS02180 (E4659_02180) | 471063..472493 | - | 1431 | WP_024104371.1 | DNA cytosine methyltransferase | - |
| E4659_RS02185 (E4659_02185) | 472733..474046 | + | 1314 | WP_024108134.1 | MvaI/BcnI family restriction endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|