MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61939 bp
Accession: NZ_CP038499 Location: 1646935..1708873 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Accession: NZ_CP038499 Location: 1646935..1708873 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4659_RS07700 (E4659_07815) | 1643600..1643962 | - | 363 | WP_035071708.1 | arsenite efflux transporter metallochaperone ArsD | - |
| E4659_RS07705 (E4659_07820) | 1644010..1644363 | - | 354 | WP_274519689.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| E4659_RS07710 (E4659_07825) | 1644747..1645543 | + | 797 | WP_234003755.1 | IS5 family transposase | - |
| E4659_RS07715 (E4659_07830) | 1645891..1646265 | + | 375 | WP_024106445.1 | hypothetical protein | - |
| E4659_RS07720 (E4659_07835) | 1646345..1646749 | + | 405 | WP_024106444.1 | DUF2513 domain-containing protein | - |
| E4659_RS07725 (E4659_07840) | 1647235..1648229 | - | 995 | Protein_1513 | IS3 family transposase | - |
| E4659_RS07730 (E4659_07845) | 1648469..1649218 | - | 750 | WP_024108537.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| E4659_RS07735 (E4659_07850) | 1649222..1650475 | - | 1254 | WP_024108538.1 | MFS transporter | - |
| E4659_RS07740 (E4659_07855) | 1650782..1651675 | + | 894 | WP_024108539.1 | phosphoenolpyruvate mutase | - |
| E4659_RS07745 (E4659_07860) | 1651679..1652797 | + | 1119 | WP_024108540.1 | phosphonopyruvate decarboxylase | - |
| E4659_RS07750 (E4659_07865) | 1652787..1654007 | + | 1221 | WP_026594701.1 | pyridoxal phosphate-dependent aminotransferase | - |
| E4659_RS07755 (E4659_07870) | 1654022..1654858 | + | 837 | WP_024108542.1 | phytanoyl-CoA dioxygenase family protein | - |
| E4659_RS07760 (E4659_07875) | 1654871..1655980 | + | 1110 | WP_024108543.1 | 2-aminoethylphosphonate--pyruvate transaminase | - |
| E4659_RS07765 (E4659_07880) | 1655977..1657077 | + | 1101 | WP_103415789.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| E4659_RS07770 (E4659_07885) | 1657067..1658086 | + | 1020 | WP_024108545.1 | GNAT family N-acetyltransferase | - |
| E4659_RS07775 (E4659_07890) | 1658079..1658243 | + | 165 | WP_116587115.1 | Trm112 family protein | - |
| E4659_RS07780 (E4659_07895) | 1658246..1659073 | + | 828 | WP_024108546.1 | class I SAM-dependent methyltransferase | - |
| E4659_RS07785 (E4659_07900) | 1659070..1660266 | + | 1197 | WP_024108547.1 | ATP-grasp domain-containing protein | - |
| E4659_RS07790 (E4659_07905) | 1660268..1660957 | + | 690 | WP_024108548.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| E4659_RS07795 (E4659_07910) | 1661033..1662004 | + | 972 | WP_024108549.1 | IS481 family transposase | - |
| E4659_RS07800 (E4659_07915) | 1662044..1662266 | - | 223 | Protein_1528 | IS4/IS5 family transposase | - |
| E4659_RS07805 (E4659_07920) | 1662393..1668212 | - | 5820 | WP_024108550.1 | DEAD/DEAH box helicase | - |
| E4659_RS07810 (E4659_07925) | 1668232..1670325 | - | 2094 | WP_024108551.1 | hypothetical protein | - |
| E4659_RS07815 (E4659_07930) | 1670337..1672910 | - | 2574 | WP_024108552.1 | hypothetical protein | - |
| E4659_RS07820 (E4659_07935) | 1672907..1674136 | - | 1230 | WP_024108553.1 | DNA cytosine methyltransferase | - |
| E4659_RS07825 (E4659_07940) | 1674835..1675779 | + | 945 | WP_116587116.1 | zincin-like metallopeptidase domain-containing protein | - |
| E4659_RS07830 (E4659_07945) | 1676106..1676342 | + | 237 | WP_024108942.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| E4659_RS07835 (E4659_07950) | 1676345..1676659 | + | 315 | WP_024108941.1 | CcdB family protein | Toxin Detail |
| E4659_RS07840 (E4659_07960) | 1677139..1677921 | + | 783 | WP_024108940.1 | hypothetical protein | - |
| E4659_RS07845 (E4659_07965) | 1678208..1678954 | - | 747 | WP_024108939.1 | MobC family replication-relaxation protein | - |
| E4659_RS07850 (E4659_07970) | 1678963..1680726 | - | 1764 | WP_024108938.1 | type IV secretion system DNA-binding domain-containing protein | - |
| E4659_RS07855 (E4659_07980) | 1681310..1681618 | - | 309 | WP_024108937.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| E4659_RS07860 (E4659_07985) | 1681659..1682675 | - | 1017 | WP_024108936.1 | hypothetical protein | VF |
| E4659_RS07865 (E4659_07990) | 1682733..1683629 | - | 897 | WP_182912466.1 | P-type conjugative transfer protein VirB9 | - |
| E4659_RS07870 (E4659_07995) | 1683626..1684309 | - | 684 | WP_024108934.1 | hypothetical protein | VF |
| E4659_RS07875 (E4659_08000) | 1684530..1685558 | - | 1029 | WP_024106435.1 | type IV secretion system protein | - |
| E4659_RS07880 (E4659_08005) | 1685570..1685794 | - | 225 | WP_012769218.1 | EexN family lipoprotein | - |
| E4659_RS07885 (E4659_08010) | 1685805..1686521 | - | 717 | WP_024108933.1 | type IV secretion system protein | - |
| E4659_RS07890 (E4659_08015) | 1686546..1688510 | - | 1965 | WP_024108932.1 | hypothetical protein | VF |
| E4659_RS07895 (E4659_08020) | 1688521..1688796 | - | 276 | WP_035044784.1 | hypothetical protein | VF |
| E4659_RS07900 (E4659_08025) | 1688816..1689463 | - | 648 | WP_026594786.1 | hypothetical protein | VF |
| E4659_RS07905 (E4659_08030) | 1689534..1689767 | - | 234 | WP_029729584.1 | hypothetical protein | - |
| E4659_RS07910 (E4659_08035) | 1690428..1693496 | + | 3069 | WP_024108930.1 | DEAD/DEAH box helicase family protein | - |
| E4659_RS07915 (E4659_08040) | 1693608..1693734 | + | 127 | Protein_1551 | IS630 family transposase | - |
| E4659_RS07920 (E4659_08045) | 1693997..1694206 | - | 210 | WP_024108929.1 | TraR/DksA family transcriptional regulator | - |
| E4659_RS07925 (E4659_08050) | 1694196..1694780 | - | 585 | WP_024108928.1 | DUF2857 domain-containing protein | - |
| E4659_RS07930 (E4659_08055) | 1694797..1694991 | - | 195 | WP_024108927.1 | AlpA family transcriptional regulator | - |
| E4659_RS07935 (E4659_08060) | 1695658..1695915 | - | 258 | WP_024106427.1 | helix-turn-helix transcriptional regulator | - |
| E4659_RS07940 (E4659_08065) | 1696029..1696307 | - | 279 | WP_024108926.1 | hypothetical protein | VF |
| E4659_RS07945 (E4659_08070) | 1696441..1696710 | + | 270 | WP_024108925.1 | helix-turn-helix transcriptional regulator | - |
| E4659_RS07950 (E4659_08075) | 1697415..1697933 | + | 519 | WP_024108924.1 | hypothetical protein | VF |
| E4659_RS07955 (E4659_08080) | 1698045..1699898 | + | 1854 | WP_024106423.1 | hypothetical protein | VF |
| E4659_RS07960 (E4659_08085) | 1699913..1700320 | + | 408 | WP_024106422.1 | DUF1795 domain-containing protein | - |
| E4659_RS07965 (E4659_08090) | 1700332..1704663 | + | 4332 | WP_024108923.1 | HNH/ENDO VII family nuclease | - |
| E4659_RS07970 (E4659_08095) | 1704660..1705091 | + | 432 | WP_024108922.1 | SMI1/KNR4 family protein | - |
| E4659_RS07975 (E4659_08100) | 1705340..1706266 | - | 927 | WP_024108921.1 | hypothetical protein | - |
| E4659_RS07980 (E4659_08105) | 1706962..1707258 | + | 297 | WP_152978274.1 | DUF736 domain-containing protein | - |
| E4659_RS07985 (E4659_08110) | 1707413..1708696 | - | 1284 | WP_024108572.1 | hypothetical protein ; Integrase | Integrase |
| E4659_RS07995 (E4659_08120) | 1709132..1712269 | - | 3138 | WP_024105239.1 | beta-galactosidase | - |
| E4659_RS08000 (E4659_08125) | 1712469..1713542 | - | 1074 | WP_024108574.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|