MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NZ_CP038494 Location: 4624384..4633824 Organism: Escherichia coli O157:H7 strain TT12B Replicon: chromosome
Accession: NZ_CP038494 Location: 4624384..4633824 Organism: Escherichia coli O157:H7 strain TT12B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5F07_RS22520 () | 4620216..4621547 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| E5F07_RS22525 () | 4621569..4622558 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| E5F07_RS22530 () | 4622657..4623595 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| E5F07_RS22535 () | 4623784..4624128 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| E5F07_RS22540 () | 4624384..4624923 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| E5F07_RS22545 () | 4624945..4626132 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| E5F07_RS22555 () | 4626648..4627793 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| E5F07_RS22560 () | 4627890..4628780 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| E5F07_RS22565 () | 4628810..4629580 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| E5F07_RS22570 () | 4629596..4630930 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| E5F07_RS22575 () | 4631305..4632876 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| E5F07_RS22580 () | 4633025..4633360 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| E5F07_RS22585 () | 4633360..4633824 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| E5F07_RS22590 () | 4633879..4634688 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| E5F07_RS22595 () | 4634937..4636217 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| E5F07_RS22600 () | 4636240..4636713 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| E5F07_RS22605 () | 4636724..4637503 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| E5F07_RS22610 () | 4637493..4638371 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| E5F07_RS22615 () | 4638389..4638823 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |