MGE detailed information
MGE type: Genomic_island MGE length: 61926 bp
Accession: NZ_CP038467 Location: 4232310..4294235 Organism: Serratia quinivorans strain PKL:12 Replicon: chromosome
Accession: NZ_CP038467 Location: 4232310..4294235 Organism: Serratia quinivorans strain PKL:12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4343_RS19825 () | 4229055..4229378 | + | 324 | WP_012146885.1 | hypothetical protein | - |
| E4343_RS19830 () | 4229443..4230324 | - | 882 | WP_135344892.1 | alpha/beta hydrolase | - |
| E4343_RS19835 () | 4230658..4231227 | + | 570 | WP_135344893.1 | MepB family protein | - |
| E4343_RS19840 () | 4231309..4231711 | - | 403 | Protein_3843 | DUF4102 domain-containing protein | - |
| E4343_RS19845 () | 4232069..4232906 | - | 838 | Protein_3844 | DUF4942 domain-containing protein | - |
| E4343_RS19850 () | 4233010..4233339 | - | 330 | WP_135344894.1 | hypothetical protein | - |
| E4343_RS19855 () | 4233336..4233704 | - | 369 | WP_135344895.1 | TA system toxin CbtA family protein | Toxin Detail |
| E4343_RS19860 () | 4233758..4234099 | - | 342 | WP_135344896.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| E4343_RS19865 () | 4234110..4234589 | - | 480 | WP_135345182.1 | DNA repair protein RadC | - |
| E4343_RS19870 () | 4234625..4235082 | - | 458 | Protein_3849 | antirestriction protein | - |
| E4343_RS19875 () | 4235252..4235608 | - | 357 | WP_135344897.1 | hypothetical protein | - |
| E4343_RS19880 () | 4235771..4236049 | - | 279 | WP_189636458.1 | hypothetical protein | - |
| E4343_RS19885 () | 4236283..4236846 | - | 564 | WP_135344898.1 | hypothetical protein | - |
| E4343_RS19890 () | 4237094..4237849 | - | 756 | WP_135345184.1 | 50S ribosome-binding GTPase | - |
| E4343_RS19895 () | 4238468..4239100 | + | 633 | WP_135344899.1 | inovirus Gp2 family protein | - |
| E4343_RS19900 () | 4239228..4239461 | + | 234 | WP_135345185.1 | AlpA family transcriptional regulator | - |
| E4343_RS19905 () | 4240217..4241806 | - | 1590 | WP_135344900.1 | DUF3987 domain-containing protein | - |
| E4343_RS19910 () | 4242132..4242533 | + | 402 | Protein_3857 | IS3 family transposase ISEc14 | Transposase |
| E4343_RS19915 () | 4242607..4243872 | - | 1266 | WP_135344901.1 | MFS transporter | - |
| E4343_RS19920 () | 4243925..4247044 | - | 3120 | WP_135344902.1 | beta-galactosidase | - |
| E4343_RS19925 () | 4247279..4248343 | + | 1065 | WP_135345186.1 | substrate-binding domain-containing protein | - |
| E4343_RS19930 () | 4248466..4248798 | + | 333 | WP_135344903.1 | IS3 family transposase ISEc31 | Transposase |
| E4343_RS19935 () | 4248795..4249256 | + | 462 | WP_135344904.1 | IS3 family transposase | - |
| E4343_RS19940 () | 4249286..4250506 | + | 1221 | Protein_3863 | ISL3 family transposase | - |
| E4343_RS19945 () | 4250511..4250807 | - | 297 | WP_135344905.1 | hypothetical protein | - |
| E4343_RS19950 () | 4250806..4251195 | + | 390 | WP_135344906.1 | DDE-type integrase/transposase/recombinase | - |
| E4343_RS19955 () | 4251156..4251356 | + | 201 | WP_135345187.1 | IS3 family transposase | - |
| E4343_RS19960 () | 4251607..4252518 | - | 912 | WP_135344907.1 | HTH-type transcriptional regulator CysL | VF |
| E4343_RS19965 () | 4252627..4254089 | + | 1463 | Protein_3868 | DASS family sodium-coupled anion symporter | - |
| E4343_RS19970 () | 4254106..4254711 | + | 606 | WP_135344908.1 | histidine phosphatase family protein | - |
| E4343_RS19975 () | 4255139..4255726 | + | 588 | WP_189636459.1 | Tyrosine recombinase XerD | VF |
| E4343_RS19980 () | 4256156..4257192 | - | 1037 | Protein_3871 | transposase | - |
| E4343_RS19985 () | 4258000..4258275 | - | 276 | WP_135344910.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E4343_RS19990 () | 4258301..4258789 | - | 489 | WP_135344911.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E4343_RS19995 () | 4259697..4260290 | + | 594 | WP_135344912.1 | Tyrosine recombinase XerD | VF |
| E4343_RS20000 () | 4260731..4261291 | + | 561 | WP_135344913.1 | Type-1 fimbrial protein, A chain | VF |
| E4343_RS20005 () | 4261356..4261904 | + | 549 | WP_135344914.1 | Type-1 fimbrial protein, A chain | VF |
| E4343_RS20010 () | 4261990..4262673 | + | 684 | WP_189636460.1 | putative fimbrial chaperone SfmC | VF |
| E4343_RS20015 () | 4262855..4265446 | + | 2592 | WP_189636461.1 | Outer membrane usher protein FimD | VF |
| E4343_RS20020 () | 4265463..4266500 | + | 1038 | WP_135344916.1 | putative fimbrial-like protein SfmH | VF |
| E4343_RS20025 () | 4266517..4267086 | + | 570 | WP_135344917.1 | Protein FimF | VF |
| E4343_RS20030 () | 4267377..4268252 | + | 876 | WP_135344918.1 | hypothetical protein | - |
| E4343_RS20035 () | 4268974..4269291 | + | 318 | WP_135344919.1 | hypothetical protein | - |
| E4343_RS20040 () | 4269307..4269717 | + | 411 | WP_135344920.1 | hypothetical protein | - |
| E4343_RS20045 () | 4269780..4270556 | + | 777 | WP_135344921.1 | hypothetical protein | - |
| E4343_RS20050 () | 4271171..4272949 | + | 1779 | WP_135344922.1 | hypothetical protein | - |
| E4343_RS20055 () | 4273034..4274875 | + | 1842 | WP_135344923.1 | hypothetical protein | VF |
| E4343_RS20060 () | 4274897..4277112 | + | 2216 | Protein_3887 | hypothetical protein | - |
| E4343_RS20065 () | 4277249..4277554 | + | 306 | Protein_3888 | transposase | - |
| E4343_RS20070 () | 4277608..4277907 | - | 300 | Protein_3889 | DDE-type integrase/transposase/recombinase | - |
| E4343_RS20075 () | 4277946..4278032 | + | 87 | Protein_3890 | transposase | - |
| E4343_RS20080 () | 4278330..4279118 | + | 789 | WP_135344924.1 | LysR family transcriptional regulator | - |
| E4343_RS20085 () | 4279205..4279519 | - | 315 | Protein_3892 | IS3 family transposase ISYps8 | Transposase |
| E4343_RS20095 () | 4279940..4284922 | - | 4983 | WP_135344925.1 | RHS repeat protein | - |
| E4343_RS20100 () | 4285322..4287073 | - | 1752 | WP_135344926.1 | C40 family peptidase | - |
| E4343_RS20110 () | 4287973..4289041 | + | 1069 | Protein_3895 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| E4343_RS20115 () | 4289248..4290141 | - | 894 | WP_135344927.1 | ParB N-terminal domain-containing protein | - |
| E4343_RS20120 () | 4290157..4291024 | - | 868 | Protein_3897 | ParB N-terminal domain-containing protein | - |
| E4343_RS20125 () | 4291029..4292522 | - | 1494 | WP_189636462.1 | IS607 family transposase ISCbt3 | Transposase |
| E4343_RS20130 () | 4292976..4294235 | - | 1260 | WP_135344928.1 | Prophage integrase IntA ; Integrase | Integrase |
| E4343_RS20140 () | 4295211..4297373 | + | 2163 | WP_012146749.1 | ornithine decarboxylase SpeF | - |
| E4343_RS20145 () | 4297478..4298590 | + | 1113 | WP_112364224.1 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|