MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67794 bp
Accession: NZ_CP038456 Location: 1..67794 Organism: Escherichia coli strain EC-129 Replicon: plasmid pEC129_3
Accession: NZ_CP038456 Location: 1..67794 Organism: Escherichia coli strain EC-129 Replicon: plasmid pEC129_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4Z89_RS25365 () | 60..1055 | - | 996 | Protein_0 | hypothetical protein | - |
| E4Z89_RS25370 () | 1320..2285 | - | 966 | WP_023338075.1 | ParB/RepB/Spo0J family partition protein | - |
| E4Z89_RS25375 () | 2282..3487 | - | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| E4Z89_RS25385 () | 3887..4747 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| E4Z89_RS25390 () | 5186..5473 | + | 288 | Protein_4 | IS3 family transposase ISEc52 | Transposase |
| E4Z89_RS25400 () | 5541..6095 | + | 555 | Protein_5 | IS30 family transposase IS30D | Transposase |
| E4Z89_RS25405 () | 6128..7096 | + | 969 | WP_175393452.1 | IS5 family transposase IS903B | Transposase |
| E4Z89_RS25410 () | 7733..8035 | - | 303 | WP_001698908.1 | HigA family addiction module antidote protein | - |
| E4Z89_RS25415 () | 8035..8316 | - | 282 | WP_021312774.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E4Z89_RS25420 () | 8523..9503 | + | 981 | WP_072666959.1 | IS5 family transposase ISEc68 | Transposase |
| E4Z89_RS25425 () | 9714..10253 | + | 540 | WP_033545677.1 | cellulose biosynthesis protein BcsO | - |
| E4Z89_RS25430 () | 10244..10681 | + | 438 | Protein_11 | AAA family ATPase | - |
| E4Z89_RS25435 () | 10674..10886 | - | 213 | WP_137088627.1 | hypothetical protein | - |
| E4Z89_RS25440 () | 10917..12410 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| E4Z89_RS25445 () | 12621..12845 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| E4Z89_RS25450 () | 12918..13622 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| E4Z89_RS25455 () | 13714..14598 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| E4Z89_RS25460 () | 14630..15829 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| E4Z89_RS25465 () | 15935..16585 | + | 651 | WP_038989485.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| E4Z89_RS25470 () | 16617..16859 | - | 243 | WP_000844627.1 | transposase | - |
| E4Z89_RS25475 () | 16917..18275 | - | 1359 | Protein_20 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| E4Z89_RS25480 () | 18343..19047 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4Z89_RS25485 () | 19091..19582 | - | 492 | Protein_22 | IS91 family transposase ISAzo26 | Transposase |
| E4Z89_RS25490 () | 19755..20207 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| E4Z89_RS25495 () | 20528..21787 | + | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| E4Z89_RS25500 () | 22052..22852 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| E4Z89_RS25505 () | 22869..23660 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| E4Z89_RS25510 () | 23735..24208 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| E4Z89_RS25515 () | 24455..25159 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4Z89_RS25520 () | 25210..26823 | - | 1614 | Protein_29 | Tn3 family transposase ISEc63 | Transposase |
| E4Z89_RS25525 () | 26887..27591 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4Z89_RS25535 () | 27648..28244 | + | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| E4Z89_RS25550 () | 29841..30089 | + | 249 | Protein_32 | IS1380 family transposase ISEcp1 | Transposase |
| E4Z89_RS25555 () | 30209..30550 | + | 342 | WP_004202492.1 | Multiple antibiotic resistance protein MarA | VF |
| E4Z89_RS25560 () | 30769..31071 | - | 303 | Protein_34 | IS6 family transposase IS15DII | Transposase |
| E4Z89_RS25565 () | 31108..31317 | - | 210 | Protein_35 | IS6 family transposase IS15DII | Transposase |
| E4Z89_RS25570 () | 31383..32897 | + | 1515 | Protein_36 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| E4Z89_RS25575 () | 32931..33236 | - | 306 | Protein_37 | IS5 family transposase IS5D | Transposase |
| E4Z89_RS25580 () | 33433..34130 | + | 698 | Protein_38 | IS1 family transposase IS1R | Transposase |
| E4Z89_RS25585 () | 34264..34692 | + | 429 | WP_001554382.1 | GFA family protein | - |
| E4Z89_RS25595 () | 35424..35759 | + | 336 | Protein_40 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| E4Z89_RS25600 () | 35955..36455 | + | 501 | Protein_41 | IS5 family transposase IS903B | Transposase |
| E4Z89_RS25605 () | 36513..37481 | - | 969 | WP_175393452.1 | IS5 family transposase IS903B | Transposase |
| E4Z89_RS25615 () | 37504..37989 | + | 486 | Protein_43 | IS5-like element IS903B family transposase | - |
| E4Z89_RS25620 () | 38015..40618 | - | 2604 | WP_032494871.1 | hypothetical protein | - |
| E4Z89_RS25625 () | 40621..42795 | - | 2175 | WP_032494870.1 | AAA family ATPase | - |
| E4Z89_RS25635 () | 44241..44327 | + | 87 | WP_111963096.1 | transposase | - |
| E4Z89_RS25640 () | 44373..45341 | - | 969 | WP_175393455.1 | IS5 family transposase IS903 | Transposase |
| E4Z89_RS25650 () | 45376..45831 | + | 456 | Protein_49 | SWF/SNF helicase family protein | - |
| E4Z89_RS25655 () | 46188..46376 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| E4Z89_RS25660 () | 46386..47585 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| E4Z89_RS26660 () | 48311..48415 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| E4Z89_RS25665 () | 48544..48801 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| E4Z89_RS25670 () | 48859..49635 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| E4Z89_RS25675 () | 49632..50375 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| E4Z89_RS25680 () | 50426..50776 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| E4Z89_RS25690 () | 51170..52243 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| E4Z89_RS25695 () | 52536..53450 | + | 915 | WP_052686739.1 | Abi family protein | - |
| E4Z89_RS25700 () | 53705..53935 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| E4Z89_RS25705 () | 53932..54348 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| E4Z89_RS25710 () | 54557..55573 | - | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| E4Z89_RS25715 () | 55738..58803 | - | 3066 | WP_000002334.1 | tetrathionate reductase subunit TtrA | - |
| E4Z89_RS25720 () | 58796..59818 | - | 1023 | WP_044864557.1 | tetrathionate reductase subunit TtrC | - |
| E4Z89_RS25725 () | 59819..60571 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| E4Z89_RS25730 () | 60781..62514 | + | 1734 | WP_080950116.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| E4Z89_RS25735 () | 62489..63073 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| E4Z89_RS25740 () | 63166..63369 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| E4Z89_RS25745 () | 63478..64194 | - | 717 | Protein_68 | IS5 family transposase IS5D | Transposase |
| E4Z89_RS25750 () | 64383..65939 | - | 1557 | WP_053897648.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| E4Z89_RS25755 () | 65964..66668 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4Z89_RS25760 () | 66851..67794 | + | 944 | WP_137088630.1 | FUSC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|