MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP038428 Location: 4882418..4891769 Organism: Escherichia coli O157:H7 strain 611 Replicon: chromosome
Accession: NZ_CP038428 Location: 4882418..4891769 Organism: Escherichia coli O157:H7 strain 611 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3149_RS24355 () | 4879149..4879868 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| E3149_RS24360 () | 4879865..4881496 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| E3149_RS24365 () | 4881677..4881907 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| E3149_RS24370 () | 4881919..4882191 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| E3149_RS24375 () | 4882418..4882714 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| E3149_RS24380 () | 4882742..4882915 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| E3149_RS24385 () | 4883034..4884551 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| E3149_RS24390 () | 4884788..4886245 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| E3149_RS24395 () | 4886304..4888451 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| E3149_RS24400 () | 4888531..4889865 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| E3149_RS24405 () | 4890231..4891769 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| E3149_RS24415 () | 4892568..4893143 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| E3149_RS24420 () | 4893180..4894877 | - | 1698 | WP_000068985.1 | protein-disulfide reductase DsbD | - |
| E3149_RS24425 () | 4894853..4895191 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| E3149_RS24430 () | 4895307..4896608 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |