MGE detailed information
MGE type: Prophage MGE length: 59677 bp
Accession: NZ_CP038419 Location: 2559523..2619199 Organism: Escherichia coli O157:H7 strain 2-6-2 Replicon: chromosome
Accession: NZ_CP038419 Location: 2559523..2619199 Organism: Escherichia coli O157:H7 strain 2-6-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U89_RS12830 () | 2555423..2556643 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| E4U89_RS12835 () | 2556768..2557463 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| E4U89_RS12840 () | 2557416..2558708 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| E4U89_RS12845 () | 2558866..2559480 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| E4U89_RS12850 () | 2559523..2560377 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| E4U89_RS12855 () | 2560379..2560996 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| E4U89_RS12860 () | 2561007..2563430 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U89_RS12865 () | 2563491..2565917 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U89_RS12870 () | 2566116..2566421 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E4U89_RS12875 () | 2566529..2567239 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E4U89_RS12880 () | 2567242..2567802 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E4U89_RS12885 () | 2567837..2568178 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E4U89_RS12890 () | 2568313..2568639 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| E4U89_RS12895 () | 2569409..2569593 | - | 185 | Protein_2523 | DUF3596 domain-containing protein | - |
| E4U89_RS12900 () | 2569628..2569879 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| E4U89_RS12905 () | 2569952..2572423 | - | 2472 | WP_000048458.1 | exonuclease | - |
| E4U89_RS12910 () | 2572516..2572707 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E4U89_RS12915 () | 2572704..2572892 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E4U89_RS12920 () | 2573293..2573457 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| E4U89_RS12925 () | 2573461..2573679 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| E4U89_RS12930 () | 2573751..2574050 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| E4U89_RS12935 () | 2574403..2574681 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U89_RS12940 () | 2574683..2574874 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E4U89_RS12945 () | 2574895..2575266 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| E4U89_RS12950 () | 2575364..2575666 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| E4U89_RS12955 () | 2575663..2576088 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E4U89_RS12960 () | 2576111..2577073 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| E4U89_RS12965 () | 2577080..2577820 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| E4U89_RS12970 () | 2577846..2578615 | + | 770 | Protein_2538 | DUF1627 domain-containing protein | - |
| E4U89_RS12975 () | 2578631..2579026 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| E4U89_RS12980 () | 2579083..2579667 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E4U89_RS12985 () | 2579783..2579887 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| E4U89_RS12990 () | 2580076..2580288 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U89_RS12995 () | 2580456..2580734 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| E4U89_RS13000 () | 2580736..2581785 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E4U89_RS13005 () | 2581798..2582157 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E4U89_RS13010 () | 2582154..2582843 | + | 690 | WP_001059381.1 | antiterminator | - |
| E4U89_RS13030 () | 2583480..2583908 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E4U89_RS13035 () | 2583905..2584160 | + | 256 | Protein_2548 | DUF3927 family protein | - |
| E4U89_RS13040 () | 2584387..2586237 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| E4U89_RS13045 () | 2586677..2586892 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E4U89_RS13050 () | 2586897..2587190 | + | 294 | WP_000731257.1 | YdfR family protein | - |
| E4U89_RS13055 () | 2587266..2587646 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| E4U89_RS13060 () | 2587643..2587990 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E4U89_RS13065 () | 2588040..2589578 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E4U89_RS13070 () | 2589617..2589691 | + | 75 | Protein_2555 | DUF1327 domain-containing protein | - |
| E4U89_RS13075 () | 2589742..2590275 | + | 534 | WP_000992137.1 | lysozyme | - |
| E4U89_RS13080 () | 2590546..2591115 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E4U89_RS13085 () | 2591115..2591261 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| E4U89_RS13090 () | 2591269..2591485 | + | 217 | Protein_2559 | endopeptidase | - |
| E4U89_RS13095 () | 2591489..2591674 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E4U89_RS13100 () | 2592099..2592326 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E4U89_RS13105 () | 2592368..2592733 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| E4U89_RS13110 () | 2593022..2593585 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| E4U89_RS13115 () | 2593582..2595243 | + | 1662 | WP_001303049.1 | terminase large subunit | - |
| E4U89_RS13120 () | 2595307..2597244 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| E4U89_RS13125 () | 2597289..2597510 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| E4U89_RS13130 () | 2597456..2600040 | + | 2585 | Protein_2567 | phage portal protein | - |
| E4U89_RS13135 () | 2600037..2600363 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| E4U89_RS13140 () | 2600373..2600723 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| E4U89_RS13145 () | 2600720..2601166 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| E4U89_RS13150 () | 2601163..2601507 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E4U89_RS13155 () | 2601566..2602282 | + | 717 | WP_001275508.1 | tail protein | - |
| E4U89_RS13160 () | 2602288..2602662 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| E4U89_RS13165 () | 2602758..2602967 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| E4U89_RS13170 () | 2603020..2606262 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| E4U89_RS13175 () | 2606255..2606596 | + | 342 | WP_000807954.1 | phage tail protein | - |
| E4U89_RS13180 () | 2606596..2607294 | + | 699 | WP_001179515.1 | phage minor tail protein L | - |
| E4U89_RS13185 () | 2607305..2608048 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| E4U89_RS13190 () | 2607994..2608626 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| E4U89_RS13195 () | 2608969..2610144 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| E4U89_RS13200 () | 2610096..2612441 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| E4U89_RS13205 () | 2612509..2613108 | + | 600 | WP_001228304.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| E4U89_RS13210 () | 2613260..2614573 | + | 1314 | WP_024748516.1 | phage tail protein | - |
| E4U89_RS13215 () | 2614575..2614844 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U89_RS13220 () | 2614957..2615531 | + | 575 | Protein_2585 | DUF1076 domain-containing protein | - |
| E4U89_RS13225 () | 2615871..2617196 | - | 1326 | WP_001025672.1 | type III secretion system effector NleA | - |
| E4U89_RS13230 () | 2617857..2618771 | - | 915 | Protein_2587 | tyrosine-type recombinase/integrase | - |
| E4U89_RS13235 () | 2618785..2618895 | + | 111 | Protein_2588 | type III effector | - |
| E4U89_RS13240 () | 2618942..2619576 | - | 635 | Protein_2589 | transposase | - |
| E4U89_RS13245 () | 2619861..2621399 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E4U89_RS13250 () | 2621449..2621796 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E4U89_RS13255 () | 2621793..2622173 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| E4U89_RS13260 () | 2622513..2622791 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| E4U89_RS13265 () | 2623219..2623365 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| E4U89_RS13270 () | 2623502..2624149 | - | 648 | WP_001303944.1 | T3SS effector E3 ubiquitin-protein ligase NleG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|