MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94184 bp
Accession: NZ_CP038418 Location: 1..94184 Organism: Escherichia coli O157:H7 strain 3-5-1 Replicon: plasmid pGM351-1
Accession: NZ_CP038418 Location: 1..94184 Organism: Escherichia coli O157:H7 strain 3-5-1 Replicon: plasmid pGM351-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U90_RS27565 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E4U90_RS27570 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U90_RS27575 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E4U90_RS27580 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E4U90_RS27585 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U90_RS27590 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U90_RS27595 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E4U90_RS27600 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E4U90_RS27605 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E4U90_RS27610 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E4U90_RS27615 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U90_RS27620 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E4U90_RS27625 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U90_RS27630 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E4U90_RS27635 () | 16095..16610 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E4U90_RS27640 () | 16612..19608 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| E4U90_RS27645 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U90_RS27650 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E4U90_RS27655 () | 23342..23834 | + | 493 | Protein_19 | Transcriptional repressor MprA | VF |
| E4U90_RS27660 () | 23965..24195 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U90_RS27665 () | 24316..25056 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U90_RS27670 () | 25341..26318 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E4U90_RS27675 () | 26726..26926 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E4U90_RS27680 () | 26923..27543 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U90_RS27685 () | 27540..28223 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U90_RS27690 () | 28682..28900 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E4U90_RS27695 () | 28902..29207 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E4U90_RS27700 () | 29208..30014 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E4U90_RS27710 () | 32004..32366 | + | 363 | Protein_30 | RepB family plasmid replication initiator protein | - |
| E4U90_RS27715 () | 32954..34120 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4U90_RS27720 () | 34120..35091 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U90_RS27725 () | 35786..36688 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U90_RS27730 () | 36692..36997 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U90_RS27735 () | 37074..37757 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E4U90_RS27740 () | 37758..37979 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U90_RS27745 () | 37873..38427 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U90_RS27750 () | 38473..38806 | + | 334 | Protein_38 | hypothetical protein | - |
| E4U90_RS27755 () | 39122..39694 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U90_RS27760 () | 39790..40092 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U90_RS27765 () | 40139..40561 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U90_RS27770 () | 40558..40749 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U90_RS27775 () | 40868..41257 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U90_RS27780 () | 41745..41975 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U90_RS27785 () | 42027..43388 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U90_RS27790 () | 43435..43998 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U90_RS27795 () | 44084..44557 | - | 474 | WP_032338770.1 | hypothetical protein | - |
| E4U90_RS27800 () | 44627..44833 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U90_RS27805 () | 44859..45311 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U90_RS27810 () | 45368..45601 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U90_RS27815 () | 45667..47625 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U90_RS27820 () | 47680..48114 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U90_RS27825 () | 48111..48872 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 48841..49039 | + | 199 | NuclAT_0 | - | - |
| - () | 48841..49039 | + | 199 | NuclAT_0 | - | - |
| - () | 48841..49039 | + | 199 | NuclAT_0 | - | - |
| - () | 48841..49039 | + | 199 | NuclAT_0 | - | - |
| E4U90_RS27830 () | 49104..49262 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U90_RS27835 () | 49396..51417 | + | 2022 | Protein_55 | hypothetical protein | Relaxase |
| E4U90_RS27840 () | 51485..51916 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U90_RS27850 () | 53873..54222 | - | 350 | Protein_58 | IS3 family transposase IS3H | Transposase |
| E4U90_RS27855 () | 54316..54579 | + | 264 | Protein_59 | IS21 family transposase ISEc62 | Transposase |
| E4U90_RS27860 () | 54619..54775 | + | 157 | Protein_60 | IS21 family transposase ISEc62 | Transposase |
| E4U90_RS27865 () | 54736..54888 | + | 153 | Protein_61 | IS1 family transposase | - |
| E4U90_RS27870 () | 54995..64504 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| E4U90_RS27875 () | 64578..64802 | + | 225 | Protein_63 | IS3 family transposase IS3H | Transposase |
| E4U90_RS27880 () | 64795..65040 | - | 246 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| E4U90_RS27885 () | 65047..65298 | - | 252 | Protein_65 | IS3 family transposase IS1203 | Transposase |
| E4U90_RS27890 () | 65355..66743 | + | 1389 | Protein_66 | Multifunctional conjugation protein TraI | Relaxase |
| E4U90_RS27895 () | 66763..67509 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U90_RS27900 () | 67568..68428 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U90_RS27905 () | 68531..69091 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U90_RS27910 () | 69224..69436 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U90_RS27915 () | 69681..70142 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| E4U90_RS27920 () | 70188..70397 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U90_RS27925 () | 70435..70773 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U90_RS27930 () | 71013..71267 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U90_RS27935 () | 71503..71577 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U90_RS27940 () | 71570..72427 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U90_RS27945 () | 73338..73622 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U90_RS27950 () | 73622..73897 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U90_RS27955 () | 73992..74198 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U90_RS27960 () | 74298..74513 | - | 216 | Protein_80 | transposase | - |
| E4U90_RS27965 () | 74557..75123 | - | 567 | Protein_81 | IS3 family transposase ISSd1 | Transposase |
| E4U90_RS27970 () | 75123..75539 | - | 417 | Protein_82 | transposase zinc-binding domain-containing protein | - |
| E4U90_RS27975 () | 75539..75724 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E4U90_RS27980 () | 75901..78111 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U90_RS27985 () | 78155..78544 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U90_RS27990 () | 78601..79589 | + | 989 | Protein_86 | IS3 family transposase IS629 | Transposase |
| E4U90_RS27995 () | 79770..83672 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| E4U90_RS28000 () | 83928..84409 | - | 482 | Protein_88 | IS1 family transposase IS1N | Transposase |
| E4U90_RS28005 () | 85850..86671 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U90_RS28010 () | 86671..87777 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U90_RS28015 () | 87867..89588 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U90_RS28020 () | 89662..90660 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U90_RS28025 () | 90713..90901 | + | 189 | Protein_93 | hypothetical protein | - |
| E4U90_RS28030 () | 91028..91408 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U90_RS28035 () | 91405..91752 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U90_RS28040 () | 91802..93340 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U90_RS28045 () | 93455..93541 | - | 87 | Protein_97 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|