MGE detailed information
MGE type: Genomic_island MGE length: 21144 bp
Accession: NZ_CP038414 Location: 4842636..4863779 Organism: Escherichia coli O157:H7 strain 17B6-2 Replicon: chromosome
Accession: NZ_CP038414 Location: 4842636..4863779 Organism: Escherichia coli O157:H7 strain 17B6-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U86_RS24155 () | 4838362..4838904 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U86_RS24160 () | 4839197..4841347 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U86_RS24165 () | 4841397..4841600 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U86_RS24170 () | 4841611..4842567 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U86_RS24175 () | 4842636..4843994 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U86_RS24180 () | 4844003..4844287 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U86_RS24185 () | 4844565..4846997 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U86_RS24190 () | 4847064..4848533 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U86_RS24195 () | 4848533..4850287 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4850437..4850513 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4850437..4850513 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U86_RS24200 () | 4850508..4850849 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U86_RS24205 () | 4850896..4852059 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U86_RS24210 () | 4852107..4852988 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U86_RS24215 () | 4853085..4853249 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U86_RS24220 () | 4853426..4854838 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U86_RS24225 () | 4855081..4855281 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U86_RS24230 () | 4855256..4856038 | - | 783 | WP_171878321.1 | hypothetical protein | VF |
| E4U86_RS24235 () | 4856505..4857737 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U86_RS24240 () | 4857778..4859049 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U86_RS24245 () | 4859165..4860316 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U86_RS24250 () | 4860326..4861093 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U86_RS24255 () | 4861090..4861356 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U86_RS24260 () | 4861668..4863779 | + | 2112 | WP_000535059.1 | hypothetical protein | VF |
| E4U86_RS24265 () | 4864045..4864887 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U86_RS24270 () | 4864955..4866133 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |