MGE detailed information
MGE type: Genomic_island MGE length: 22417 bp
Accession: NZ_CP038412 Location: 4757974..4780390 Organism: Escherichia coli O157:H7 strain 493/89 Replicon: chromosome
Accession: NZ_CP038412 Location: 4757974..4780390 Organism: Escherichia coli O157:H7 strain 493/89 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3172_RS23650 () | 4753700..4754242 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E3172_RS23655 () | 4754535..4756685 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3172_RS23660 () | 4756735..4756938 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3172_RS23665 () | 4756949..4757905 | + | 957 | WP_001297640.1 | GTPase | - |
| E3172_RS23670 () | 4757974..4759332 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3172_RS23675 () | 4759341..4759625 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3172_RS23680 () | 4759903..4762335 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3172_RS23685 () | 4762402..4763871 | + | 1470 | WP_001359035.1 | type I restriction-modification system subunit M | - |
| E3172_RS23690 () | 4763871..4765625 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4765775..4765851 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4765775..4765851 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E3172_RS23695 () | 4765846..4766187 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3172_RS23700 () | 4766234..4767397 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3172_RS23705 () | 4767445..4768326 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3172_RS23710 () | 4768423..4768587 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3172_RS23715 () | 4768764..4769783 | + | 1020 | Protein_4650 | PLP-dependent aminotransferase family protein | - |
| E3172_RS23720 () | 4769845..4770996 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| E3172_RS23725 () | 4771004..4771399 | + | 396 | Protein_4652 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E3172_RS23730 () | 4771642..4772574 | - | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| E3172_RS23735 () | 4773041..4774273 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3172_RS23740 () | 4774314..4775594 | + | 1281 | WP_001037388.1 | DUF445 domain-containing protein | - |
| E3172_RS23745 () | 4775710..4776861 | + | 1152 | WP_001358746.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3172_RS23750 () | 4776871..4777638 | + | 768 | WP_000222487.1 | hypothetical protein | - |
| E3172_RS23755 () | 4777635..4777901 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3172_RS23760 () | 4778213..4780390 | + | 2178 | WP_000535055.1 | hypothetical protein | VF |
| E3172_RS23765 () | 4780655..4781497 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3172_RS23770 () | 4781565..4782743 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.005 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.005 |