MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP038402 Location: 4907457..4928675 Organism: Escherichia coli O157:H7 strain BB24-1 Replicon: chromosome
Accession: NZ_CP038402 Location: 4907457..4928675 Organism: Escherichia coli O157:H7 strain BB24-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U87_RS24730 () | 4903183..4903725 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U87_RS24735 () | 4904018..4906168 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U87_RS24740 () | 4906218..4906421 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U87_RS24745 () | 4906432..4907388 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U87_RS24750 () | 4907457..4908815 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U87_RS24755 () | 4908824..4909108 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U87_RS24760 () | 4909386..4911818 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U87_RS24765 () | 4911885..4913354 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U87_RS24770 () | 4913354..4915108 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4915258..4915334 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4915258..4915334 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U87_RS24775 () | 4915329..4915670 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U87_RS24780 () | 4915717..4916880 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U87_RS24785 () | 4916928..4917809 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U87_RS24790 () | 4917906..4918070 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U87_RS24795 () | 4918247..4919659 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U87_RS24800 () | 4919902..4920102 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U87_RS24805 () | 4920077..4920859 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U87_RS24810 () | 4921326..4922558 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U87_RS24815 () | 4922599..4923870 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U87_RS24820 () | 4923986..4925137 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U87_RS24825 () | 4925147..4925914 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U87_RS24830 () | 4925911..4926177 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U87_RS24835 () | 4926489..4928675 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| E4U87_RS24840 () | 4928941..4929783 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U87_RS24845 () | 4929851..4931029 | + | 1179 | Protein_4872 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |