MGE detailed information
MGE type: Conjugative plasmid MGE length: 80565 bp
Accession: NZ_CP038385 Location: 1..80565 Organism: Escherichia coli O157:H7 strain DEC5E Replicon: plasmid pDEC5E-2
Accession: NZ_CP038385 Location: 1..80565 Organism: Escherichia coli O157:H7 strain DEC5E Replicon: plasmid pDEC5E-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3158_RS27630 () | 1..261 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| E3158_RS27635 () | 486..560 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| E3158_RS27640 () | 553..1410 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| E3158_RS27645 () | 2111..2251 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| E3158_RS27650 () | 2349..3002 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| E3158_RS27655 () | 3095..3352 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| E3158_RS27660 () | 3285..3686 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| E3158_RS27665 () | 3971..5281 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| E3158_RS27670 () | 5310..6007 | + | 698 | Protein_8 | IS1 family transposase IS1R | Transposase |
| E3158_RS27675 () | 6114..6548 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| E3158_RS27680 () | 6620..6970 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| E3158_RS27685 () | 6984..7259 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| E3158_RS27690 () | 7295..7717 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| E3158_RS27695 () | 7769..9463 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| E3158_RS27700 () | 9481..9843 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| E3158_RS27705 () | 9840..10076 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| E3158_RS27710 () | 10112..10780 | + | 669 | WP_001300294.1 | hypothetical protein | VF |
| E3158_RS27715 () | 10855..12534 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| E3158_RS27720 () | 12537..13397 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| E3158_RS27725 () | 13448..14992 | - | 1545 | WP_000287615.1 | IS3 family transposase IS1353 | Transposase |
| E3158_RS27730 () | 15171..15671 | - | 501 | WP_171879538.1 | GNAT family N-acetyltransferase | - |
| E3158_RS27735 () | 15799..16638 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| E3158_RS27740 () | 16632..16979 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| E3158_RS27745 () | 17143..17934 | - | 792 | WP_001206316.1 | hypothetical protein | ARG |
| E3158_RS27750 () | 18083..19096 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| E3158_RS27755 () | 19299..19649 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| E3158_RS27760 () | 19775..20335 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| E3158_RS27765 () | 20338..23304 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| E3158_RS27770 () | 23371..23748 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| E3158_RS27775 () | 23949..24608 | - | 660 | WP_000412211.1 | hypothetical protein | ARG |
| E3158_RS27780 () | 24887..25584 | + | 698 | Protein_30 | IS1 family transposase IS1R | Transposase |
| E3158_RS27785 () | 27033..27267 | + | 235 | Protein_31 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E3158_RS27790 () | 27395..27676 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| E3158_RS27795 () | 27799..28149 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| E3158_RS27800 () | 28152..29114 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| E3158_RS27805 () | 29261..29554 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| E3158_RS27810 () | 29631..30314 | + | 684 | WP_000085883.1 | DNA methylase | - |
| E3158_RS27815 () | 30315..30536 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| E3158_RS27820 () | 30550..30984 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| E3158_RS27825 () | 31035..31799 | + | 765 | Protein_39 | hypothetical protein | - |
| E3158_RS27830 () | 31684..32256 | + | 573 | WP_001333091.1 | YubH family protein | - |
| E3158_RS27835 () | 32352..32654 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| E3158_RS27840 () | 32701..33123 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| E3158_RS27845 () | 33120..33311 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| E3158_RS27850 () | 33584..33832 | - | 249 | WP_071557811.1 | hypothetical protein | - |
| E3158_RS27855 () | 34349..34579 | + | 231 | WP_000218647.1 | hypothetical protein | - |
| E3158_RS27860 () | 34631..35992 | + | 1362 | WP_000170713.1 | DUF3560 domain-containing protein | - |
| E3158_RS27865 () | 36039..36602 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| E3158_RS27870 () | 36906..37130 | - | 225 | WP_001427866.1 | hypothetical protein | - |
| E3158_RS27875 () | 37053..37244 | + | 192 | WP_032140903.1 | hypothetical protein | - |
| E3158_RS27880 () | 37472..37999 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| E3158_RS27885 () | 38055..38288 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| E3158_RS27890 () | 38347..40305 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| E3158_RS27895 () | 40360..40794 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| E3158_RS27900 () | 40791..41510 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| E3158_RS27905 () | 41522..41710 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 41522..41746 | + | 225 | NuclAT_0 | - | - |
| - () | 41522..41746 | + | 225 | NuclAT_0 | - | - |
| - () | 41522..41746 | + | 225 | NuclAT_0 | - | - |
| - () | 41522..41746 | + | 225 | NuclAT_0 | - | - |
| - () | 41679..41744 | + | 66 | - | - | Antitoxin Detail |
| E3158_RS27910 () | 41790..41948 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| E3158_RS27915 () | 42302..42526 | - | 225 | WP_001340580.1 | hypothetical protein | - |
| E3158_RS27920 () | 42449..42640 | + | 192 | WP_032140903.1 | hypothetical protein | - |
| E3158_RS27925 () | 42867..43154 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| E3158_RS27930 () | 43275..44096 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| E3158_RS27935 () | 44393..45040 | - | 648 | WP_000614282.1 | hypothetical protein | VF |
| E3158_RS27940 () | 45326..45709 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| E3158_RS27945 () | 45903..46589 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| E3158_RS27950 () | 46683..46910 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| E3158_RS27955 () | 46944..47306 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| E3158_RS27960 () | 47311..47622 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3158_RS27965 () | 47644..48210 | + | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| E3158_RS27970 () | 48221..48925 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| E3158_RS27975 () | 48925..50352 | + | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| E3158_RS27980 () | 50342..50926 | + | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| E3158_RS27985 () | 50880..51233 | + | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| E3158_RS27990 () | 51226..51477 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| E3158_RS27995 () | 51474..51989 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3158_RS28000 () | 52124..52345 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| E3158_RS28005 () | 52505..55132 | + | 2628 | WP_001064256.1 | type IV secretion system protein TraC | - |
| E3158_RS28010 () | 55129..55515 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| E3158_RS28015 () | 55512..56144 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| E3158_RS28020 () | 56141..57133 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| E3158_RS28025 () | 57163..57468 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| E3158_RS28030 () | 57477..58115 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3158_RS28035 () | 58112..59920 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3158_RS28040 () | 59947..60204 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| E3158_RS28045 () | 60197..60940 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3158_RS28050 () | 60956..61294 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| E3158_RS28055 () | 61421..61705 | + | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E3158_RS28060 () | 61692..62237 | + | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3158_RS28065 () | 62167..62508 | + | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| E3158_RS28070 () | 62456..62881 | + | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| E3158_RS28075 () | 62868..64241 | + | 1374 | WP_001137364.1 | conjugal transfer protein TraH | - |
| E3158_RS28080 () | 64238..67057 | + | 2820 | WP_001007057.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3158_RS28085 () | 67076..67573 | + | 498 | WP_000605861.1 | hypothetical protein | - |
| E3158_RS28090 () | 67605..68336 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| E3158_RS28095 () | 68589..70778 | + | 2190 | WP_001419971.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3158_RS28100 () | 70778..76048 | + | 5271 | WP_000986934.1 | Multifunctional conjugation protein TraI | Relaxase |
| E3158_RS28105 () | 76068..76814 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| E3158_RS28110 () | 76873..77733 | + | 861 | WP_000704528.1 | hypothetical protein | VF |
| E3158_RS28115 () | 77836..78396 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| E3158_RS28120 () | 78525..78737 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| E3158_RS28125 () | 78982..79443 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| E3158_RS28130 () | 79489..79698 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| E3158_RS28135 () | 79736..80326 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|