MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NZ_CP038376 Location: 4811528..4820968 Organism: Escherichia coli O157:H7 strain F1273 Replicon: chromosome
Accession: NZ_CP038376 Location: 4811528..4820968 Organism: Escherichia coli O157:H7 strain F1273 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3159_RS23995 () | 4807360..4808691 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| E3159_RS24000 () | 4808713..4809702 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| E3159_RS24005 () | 4809801..4810739 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| E3159_RS24010 () | 4810928..4811272 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| E3159_RS24015 () | 4811528..4812067 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| E3159_RS24020 () | 4812089..4813276 | + | 1188 | WP_000484641.1 | YhaC family protein | - |
| E3159_RS24030 () | 4813792..4814937 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| E3159_RS24035 () | 4815034..4815924 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| E3159_RS24040 () | 4815954..4816724 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| E3159_RS24045 () | 4816740..4818074 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| E3159_RS24050 () | 4818449..4820020 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| E3159_RS24055 () | 4820169..4820504 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| E3159_RS24060 () | 4820504..4820968 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| E3159_RS24065 () | 4821023..4821832 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| E3159_RS24070 () | 4822081..4823361 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| E3159_RS24075 () | 4823384..4823857 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| E3159_RS24080 () | 4823868..4824647 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| E3159_RS24085 () | 4824637..4825515 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| E3159_RS24090 () | 4825533..4825967 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |