MGE detailed information
MGE type: Genomic_island MGE length: 10154 bp
Accession: NZ_CP038374 Location: 4744654..4754807 Organism: Escherichia coli O157:H7 strain F3113 Replicon: chromosome
Accession: NZ_CP038374 Location: 4744654..4754807 Organism: Escherichia coli O157:H7 strain F3113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3160_RS23250 () | 4739852..4741060 | - | 1209 | WP_001358708.1 | propionate kinase | - |
| E3160_RS23255 () | 4741086..4742417 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| E3160_RS23260 () | 4742439..4743428 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| E3160_RS23265 () | 4743527..4744465 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| E3160_RS23270 () | 4744654..4744998 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| E3160_RS23275 () | 4745254..4745793 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| E3160_RS23280 () | 4745815..4747002 | + | 1188 | WP_000484581.1 | YhaC family protein | - |
| E3160_RS23290 () | 4747631..4748776 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| E3160_RS23295 () | 4748873..4749763 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| E3160_RS23300 () | 4749793..4750563 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| E3160_RS23305 () | 4750579..4751913 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| E3160_RS23310 () | 4752288..4753859 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| E3160_RS23315 () | 4754008..4754343 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| E3160_RS23320 () | 4754343..4754807 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| E3160_RS23325 () | 4754862..4755671 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| E3160_RS23330 () | 4755920..4757200 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| E3160_RS23335 () | 4757223..4757696 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| E3160_RS23340 () | 4757707..4758486 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| E3160_RS23345 () | 4758476..4759354 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| E3160_RS23350 () | 4759372..4759806 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |