MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP038372 Location: 4905850..4927089 Organism: Escherichia coli O157:H7 strain F6294 Replicon: chromosome
Accession: NZ_CP038372 Location: 4905850..4927089 Organism: Escherichia coli O157:H7 strain F6294 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3161_RS24760 () | 4901576..4902118 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E3161_RS24765 () | 4902411..4904561 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3161_RS24770 () | 4904611..4904814 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3161_RS24775 () | 4904825..4905781 | + | 957 | WP_001297640.1 | GTPase | - |
| E3161_RS24780 () | 4905850..4907208 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3161_RS24785 () | 4907217..4907501 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3161_RS24790 () | 4907779..4910211 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3161_RS24795 () | 4910278..4911747 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E3161_RS24800 () | 4911747..4913501 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4913651..4913727 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - () | 4913651..4913727 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| E3161_RS24805 () | 4913722..4914063 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3161_RS24810 () | 4914110..4915273 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3161_RS24815 () | 4915321..4916202 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3161_RS24820 () | 4916299..4916463 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3161_RS24825 () | 4916640..4918052 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E3161_RS24830 () | 4918295..4918495 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E3161_RS24835 () | 4918470..4919252 | - | 783 | WP_001303778.1 | hypothetical protein | VF |
| E3161_RS24840 () | 4919719..4920951 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3161_RS24845 () | 4920992..4922263 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E3161_RS24850 () | 4922379..4923530 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3161_RS24855 () | 4923540..4924307 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E3161_RS24860 () | 4924304..4924570 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3161_RS24865 () | 4924882..4927089 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| E3161_RS24870 () | 4927355..4928197 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3161_RS24875 () | 4928265..4929443 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |