MGE detailed information
MGE type: Genomic_island MGE length: 25489 bp
Accession: NZ_CP038369 Location: 4827067..4852555 Organism: Escherichia coli O157:H7 strain F6321 Replicon: chromosome
Accession: NZ_CP038369 Location: 4827067..4852555 Organism: Escherichia coli O157:H7 strain F6321 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3162_RS24305 () | 4822635..4823549 | + | 915 | WP_000091572.1 | GntR family transcriptional regulator | - |
| E3162_RS24310 () | 4823764..4825125 | + | 1362 | WP_000410140.1 | MFS transporter | - |
| E3162_RS24315 () | 4825174..4826838 | - | 1665 | WP_000919571.1 | methyl-accepting chemotaxis protein | - |
| E3162_RS24320 () | 4827067..4827609 | + | 543 | Protein_4759 | hypothetical protein | - |
| E3162_RS24325 () | 4827902..4830052 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3162_RS24330 () | 4830102..4830305 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3162_RS24335 () | 4830316..4831272 | + | 957 | WP_001297640.1 | GTPase | - |
| E3162_RS24340 () | 4831341..4832699 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3162_RS24345 () | 4832708..4832992 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E3162_RS24350 () | 4833270..4835702 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3162_RS24355 () | 4835769..4837238 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E3162_RS24360 () | 4837238..4838992 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4839142..4839218 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4839142..4839218 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E3162_RS24365 () | 4839213..4839554 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E3162_RS24370 () | 4839601..4840764 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3162_RS24375 () | 4840812..4841693 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3162_RS24380 () | 4841790..4841954 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3162_RS24385 () | 4842131..4843543 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E3162_RS24390 () | 4843786..4844742 | - | 957 | Protein_4773 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3162_RS24395 () | 4845209..4846441 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3162_RS24400 () | 4846482..4847753 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E3162_RS24405 () | 4847869..4849020 | + | 1152 | WP_001457419.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3162_RS24410 () | 4849030..4849797 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E3162_RS24415 () | 4849794..4850060 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3162_RS24420 () | 4850372..4852555 | + | 2184 | WP_000535060.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| E3162_RS24425 () | 4852821..4853663 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3162_RS24430 () | 4853731..4854909 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.008 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.008 |