MGE detailed information
MGE type: Genomic_island MGE length: 21221 bp
Accession: NZ_CP038366 Location: 4817941..4839161 Organism: Escherichia coli O157:H7 strain F6667 Replicon: chromosome
Accession: NZ_CP038366 Location: 4817941..4839161 Organism: Escherichia coli O157:H7 strain F6667 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U72_RS24140 () | 4813667..4814209 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U72_RS24145 () | 4814502..4816652 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U72_RS24150 () | 4816702..4816905 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U72_RS24155 () | 4816916..4817872 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U72_RS24160 () | 4817941..4819299 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U72_RS24165 () | 4819308..4819592 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U72_RS24170 () | 4819870..4822302 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U72_RS24175 () | 4822369..4823838 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U72_RS24180 () | 4823838..4825592 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4825742..4825818 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825742..4825818 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U72_RS24185 () | 4825813..4826154 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U72_RS24190 () | 4826201..4827364 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U72_RS24195 () | 4827412..4828293 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U72_RS24200 () | 4828390..4828554 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U72_RS24205 () | 4828731..4830143 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U72_RS24210 () | 4830386..4831342 | - | 957 | Protein_4739 | hypothetical protein | VF |
| E4U72_RS24215 () | 4831809..4833041 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U72_RS24220 () | 4833082..4834353 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U72_RS24225 () | 4834469..4835620 | + | 1152 | WP_001457419.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U72_RS24230 () | 4835630..4836397 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U72_RS24235 () | 4836394..4836660 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U72_RS24240 () | 4836972..4839161 | + | 2190 | WP_000535066.1 | hypothetical protein | VF |
| E4U72_RS24245 () | 4839427..4840269 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U72_RS24250 () | 4840337..4841515 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |