MGE detailed information
MGE type: Prophage MGE length: 57900 bp
Accession: NZ_CP038363 Location: 2461808..2519707 Organism: Escherichia coli O157:H7 strain F7349 Replicon: chromosome
Accession: NZ_CP038363 Location: 2461808..2519707 Organism: Escherichia coli O157:H7 strain F7349 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U70_RS12165 () | 2457708..2458928 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| E4U70_RS12170 () | 2459053..2459748 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| E4U70_RS12175 () | 2459701..2460993 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| E4U70_RS12180 () | 2461151..2461765 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| E4U70_RS12185 () | 2461808..2462662 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| E4U70_RS12190 () | 2462664..2463281 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| E4U70_RS12195 () | 2463292..2465715 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U70_RS12200 () | 2465776..2468202 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| E4U70_RS12205 () | 2468401..2468706 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E4U70_RS12210 () | 2468814..2469524 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E4U70_RS12215 () | 2469527..2470087 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E4U70_RS12220 () | 2470122..2470463 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E4U70_RS12225 () | 2470598..2470924 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| E4U70_RS12230 () | 2471196..2471878 | - | 683 | Protein_2393 | DUF3596 domain-containing protein | - |
| E4U70_RS12235 () | 2471913..2472164 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| E4U70_RS12240 () | 2472237..2474708 | - | 2472 | WP_000048458.1 | exonuclease | - |
| E4U70_RS12245 () | 2474801..2474992 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E4U70_RS12250 () | 2474989..2475177 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E4U70_RS12255 () | 2475578..2475742 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| E4U70_RS12260 () | 2475746..2475964 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| E4U70_RS12265 () | 2476036..2476335 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| E4U70_RS12270 () | 2476688..2476966 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U70_RS12275 () | 2476968..2477159 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E4U70_RS12280 () | 2477180..2477551 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| E4U70_RS12285 () | 2477649..2477951 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| E4U70_RS12290 () | 2477948..2478373 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E4U70_RS12295 () | 2478396..2479358 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| E4U70_RS12300 () | 2479365..2480105 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| E4U70_RS12305 () | 2480131..2480900 | + | 770 | Protein_2408 | DUF1627 domain-containing protein | - |
| E4U70_RS12310 () | 2480916..2481311 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| E4U70_RS12315 () | 2481368..2481952 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E4U70_RS12320 () | 2482068..2482172 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| E4U70_RS12325 () | 2482361..2482573 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U70_RS12330 () | 2482741..2483019 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| E4U70_RS12335 () | 2483021..2484070 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E4U70_RS12340 () | 2484083..2484319 | + | 237 | Protein_2415 | RusA family crossover junction endodeoxyribonuclease | - |
| E4U70_RS12350 () | 2485752..2486441 | + | 690 | WP_001059381.1 | antiterminator | - |
| E4U70_RS12370 () | 2487081..2487509 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E4U70_RS12375 () | 2487506..2487761 | + | 256 | Protein_2419 | DUF3927 family protein | - |
| E4U70_RS12380 () | 2487988..2489838 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E4U70_RS12385 () | 2490278..2490493 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E4U70_RS12390 () | 2490498..2490842 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| E4U70_RS12395 () | 2490893..2491426 | + | 534 | WP_000992137.1 | lysozyme | - |
| E4U70_RS12400 () | 2491697..2492266 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E4U70_RS12405 () | 2492266..2492412 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| E4U70_RS12410 () | 2492420..2492636 | + | 217 | Protein_2426 | endopeptidase | - |
| E4U70_RS12415 () | 2492640..2492825 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E4U70_RS12420 () | 2493250..2493477 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E4U70_RS12425 () | 2493519..2493884 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| E4U70_RS12430 () | 2494173..2494736 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| E4U70_RS12435 () | 2494733..2496394 | + | 1662 | WP_038425863.1 | terminase large subunit | - |
| E4U70_RS12440 () | 2496458..2498395 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| E4U70_RS12445 () | 2498440..2498661 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| E4U70_RS12450 () | 2498607..2501186 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| E4U70_RS12455 () | 2501189..2501515 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| E4U70_RS12460 () | 2501525..2501875 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| E4U70_RS12465 () | 2501872..2502318 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E4U70_RS12470 () | 2502315..2502659 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E4U70_RS12475 () | 2502725..2503441 | + | 717 | WP_060722693.1 | phage tail protein | - |
| E4U70_RS12480 () | 2503447..2503821 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| E4U70_RS12485 () | 2503917..2504126 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| E4U70_RS12490 () | 2504179..2507421 | + | 3243 | WP_000212898.1 | phage tail tape measure protein | - |
| E4U70_RS12495 () | 2507414..2507755 | + | 342 | WP_000807954.1 | phage tail protein | - |
| E4U70_RS12500 () | 2507755..2508453 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E4U70_RS12505 () | 2508464..2509207 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| E4U70_RS12510 () | 2509153..2509785 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| E4U70_RS12515 () | 2510127..2511302 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| E4U70_RS12520 () | 2511254..2513599 | + | 2346 | WP_115801855.1 | host specificity protein J | - |
| E4U70_RS12525 () | 2513667..2514266 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| E4U70_RS12530 () | 2514418..2515731 | + | 1314 | WP_000216532.1 | ISNCY family transposase KIS | Transposase |
| E4U70_RS12535 () | 2515733..2516002 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U70_RS12540 () | 2516115..2516689 | + | 575 | Protein_2452 | hypothetical protein | VF |
| E4U70_RS12545 () | 2517029..2518354 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| E4U70_RS12550 () | 2519015..2519929 | - | 915 | Protein_2454 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E4U70_RS12555 () | 2519952..2520074 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U70_RS12560 () | 2520181..2521092 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| E4U70_RS12565 () | 2521158..2521727 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| E4U70_RS12570 () | 2521774..2522408 | - | 635 | Protein_2458 | transposase | - |
| E4U70_RS12575 () | 2522693..2524231 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E4U70_RS12580 () | 2524281..2524628 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.007 |