MGE detailed information
MGE type: Prophage MGE length: 64327 bp
Accession: NZ_CP038349 Location: 2565619..2629945 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Accession: NZ_CP038349 Location: 2565619..2629945 Organism: Escherichia coli O157:H7 strain F8952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U62_RS12610 () | 2560659..2561690 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| E4U62_RS12615 () | 2561934..2562191 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| E4U62_RS12620 () | 2562241..2563191 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| E4U62_RS12625 () | 2563343..2564095 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| E4U62_RS12630 () | 2564290..2564805 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| E4U62_RS12635 () | 2564816..2565577 | - | 762 | Protein_2471 | AbgT family transporter | - |
| E4U62_RS12645 () | 2566888..2567655 | - | 768 | Protein_2473 | AbgT family transporter | - |
| E4U62_RS12650 () | 2567692..2569137 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| E4U62_RS12655 () | 2569137..2570447 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| E4U62_RS12660 () | 2570623..2571531 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| E4U62_RS12665 () | 2571861..2572424 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| E4U62_RS12670 () | 2572445..2573677 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| E4U62_RS12675 () | 2573932..2574915 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| E4U62_RS12680 () | 2575190..2575360 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| E4U62_RS12685 () | 2575393..2576766 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| E4U62_RS12690 () | 2576895..2577830 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| E4U62_RS12695 () | 2577882..2579117 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| E4U62_RS12700 () | 2579119..2579334 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| E4U62_RS12705 () | 2579434..2579622 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2579438..2579616 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2579438..2579616 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2579438..2579616 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2579438..2579616 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| E4U62_RS12710 () | 2579660..2579809 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| E4U62_RS12715 () | 2579865..2580674 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| E4U62_RS12720 () | 2580667..2583267 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| E4U62_RS12725 () | 2583369..2583644 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| E4U62_RS12730 () | 2583719..2583889 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| E4U62_RS12735 () | 2583889..2584110 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| E4U62_RS12740 () | 2584552..2585040 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| E4U62_RS12745 () | 2585037..2585192 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| E4U62_RS12750 () | 2585203..2585382 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| E4U62_RS12755 () | 2585625..2586044 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| E4U62_RS12760 () | 2586124..2586378 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| E4U62_RS12765 () | 2586375..2586797 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| E4U62_RS12770 () | 2586875..2587663 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| E4U62_RS12775 () | 2587670..2588416 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| E4U62_RS12780 () | 2588439..2589200 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| E4U62_RS12785 () | 2589216..2589638 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| E4U62_RS12790 () | 2589744..2589956 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| E4U62_RS12795 () | 2589989..2590206 | + | 218 | Protein_2503 | DUF4014 family protein | - |
| E4U62_RS12800 () | 2590208..2590471 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| E4U62_RS12805 () | 2590482..2590643 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| E4U62_RS12810 () | 2590722..2590967 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| E4U62_RS12815 () | 2591399..2592550 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| E4U62_RS12820 () | 2592518..2593507 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| E4U62_RS12825 () | 2593507..2594898 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| E4U62_RS12830 () | 2595398..2595997 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| E4U62_RS12835 () | 2595997..2596287 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| E4U62_RS12840 () | 2596284..2596838 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| E4U62_RS12855 () | 2597400..2597831 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| E4U62_RS12860 () | 2597828..2598083 | + | 256 | Protein_2514 | DUF3927 family protein | - |
| E4U62_RS12865 () | 2598406..2600256 | + | 1851 | WP_098049826.1 | SASA family carbohydrate esterase | - |
| E4U62_RS12870 () | 2600695..2600910 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E4U62_RS12875 () | 2600915..2601259 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| E4U62_RS12880 () | 2601310..2601843 | + | 534 | WP_000992137.1 | lysozyme | - |
| E4U62_RS12885 () | 2602114..2602683 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E4U62_RS12890 () | 2602683..2602829 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| E4U62_RS12895 () | 2603052..2603237 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| E4U62_RS12900 () | 2603763..2604077 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| E4U62_RS12905 () | 2604159..2604383 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| E4U62_RS12910 () | 2604770..2605315 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| E4U62_RS12915 () | 2605290..2607215 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| E4U62_RS12920 () | 2607212..2607418 | + | 207 | WP_000198153.1 | gpW family protein | - |
| E4U62_RS12925 () | 2607415..2609016 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| E4U62_RS12930 () | 2608997..2610316 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| E4U62_RS12935 () | 2610326..2610658 | + | 333 | WP_001295978.1 | head decoration protein | - |
| E4U62_RS12940 () | 2610714..2611739 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| E4U62_RS12945 () | 2611781..2612179 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| E4U62_RS12950 () | 2612191..2612544 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| E4U62_RS12955 () | 2612559..2613092 | + | 534 | WP_000975020.1 | phage tail protein | - |
| E4U62_RS12960 () | 2613089..2613484 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| E4U62_RS12965 () | 2613492..2614244 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| E4U62_RS12970 () | 2614258..2614680 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| E4U62_RS12975 () | 2614707..2615120 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| E4U62_RS12980 () | 2615101..2617713 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| E4U62_RS12985 () | 2617710..2618039 | + | 330 | WP_000847298.1 | phage tail protein | - |
| E4U62_RS12990 () | 2618039..2618737 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| E4U62_RS12995 () | 2618748..2619491 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| E4U62_RS13000 () | 2619437..2620066 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| E4U62_RS13005 () | 2620307..2623786 | + | 3480 | WP_000514945.1 | host specificity protein J | - |
| E4U62_RS13010 () | 2623854..2624453 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| E4U62_RS13015 () | 2624518..2625741 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E4U62_RS13020 () | 2625743..2626012 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| E4U62_RS13025 () | 2626126..2626701 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| E4U62_RS13030 () | 2626774..2627403 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| E4U62_RS13035 () | 2627485..2628126 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| E4U62_RS13040 () | 2628288..2628530 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| E4U62_RS13045 () | 2628662..2629945 | + | 1284 | WP_000347470.1 | MHS family MFS transporter | - |
| E4U62_RS13050 () | 2630034..2631494 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| E4U62_RS13055 () | 2631530..2631733 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E4U62_RS13060 () | 2631910..2632596 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| E4U62_RS13065 () | 2632685..2633431 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|