MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP038344 Location: 4710678..4731887 Organism: Escherichia coli O157:H7 strain Gim1-1 Replicon: chromosome
Accession: NZ_CP038344 Location: 4710678..4731887 Organism: Escherichia coli O157:H7 strain Gim1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U63_RS23340 () | 4706404..4706946 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U63_RS23345 () | 4707239..4709389 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U63_RS23350 () | 4709439..4709642 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U63_RS23355 () | 4709653..4710609 | + | 957 | WP_001459238.1 | GTPase | - |
| E4U63_RS23360 () | 4710678..4712036 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U63_RS23365 () | 4712045..4712329 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U63_RS23370 () | 4712607..4715039 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U63_RS23375 () | 4715106..4716575 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U63_RS23380 () | 4716575..4718329 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4718479..4718555 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4718479..4718555 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E4U63_RS23385 () | 4718550..4718891 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U63_RS23390 () | 4718938..4720101 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U63_RS23395 () | 4720149..4721030 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U63_RS23400 () | 4721127..4721291 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U63_RS23405 () | 4721468..4722880 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U63_RS23410 () | 4723123..4723323 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U63_RS23415 () | 4723298..4724080 | - | 783 | WP_001303778.1 | hypothetical protein | VF |
| E4U63_RS23420 () | 4724547..4725779 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U63_RS23425 () | 4725820..4727091 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U63_RS23430 () | 4727207..4728358 | + | 1152 | WP_001459237.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U63_RS23435 () | 4728368..4729135 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U63_RS23440 () | 4729132..4729398 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U63_RS23445 () | 4729710..4731887 | + | 2178 | WP_000535056.1 | hypothetical protein | VF |
| E4U63_RS23450 () | 4732153..4732995 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U63_RS23455 () | 4733063..4734241 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |