MGE detailed information
MGE type: Prophage MGE length: 98337 bp
Accession: NZ_CP038342 Location: 2461602..2559938 Organism: Escherichia coli O157:H7 strain H2495 Replicon: chromosome
Accession: NZ_CP038342 Location: 2461602..2559938 Organism: Escherichia coli O157:H7 strain H2495 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3163_RS12150 () | 2457851..2460277 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| E3163_RS12155 () | 2460476..2460781 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| E3163_RS12160 () | 2460889..2461599 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| E3163_RS12165 () | 2461602..2462162 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E3163_RS12170 () | 2462197..2462538 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| E3163_RS12175 () | 2462673..2462999 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| E3163_RS12180 () | 2463271..2463953 | - | 683 | Protein_2383 | DUF3596 domain-containing protein | - |
| E3163_RS12185 () | 2463988..2464239 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| E3163_RS12190 () | 2464312..2466783 | - | 2472 | WP_000048458.1 | exonuclease | - |
| E3163_RS12195 () | 2466876..2467067 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| E3163_RS12200 () | 2467064..2467252 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| E3163_RS12205 () | 2467653..2467817 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| E3163_RS12210 () | 2467821..2468039 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| E3163_RS12215 () | 2468111..2468410 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| E3163_RS12220 () | 2468763..2469041 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3163_RS12225 () | 2469043..2469234 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E3163_RS12230 () | 2469255..2469626 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| E3163_RS12235 () | 2469724..2470026 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| E3163_RS12240 () | 2470023..2470448 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E3163_RS12245 () | 2470471..2471433 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| E3163_RS12250 () | 2471440..2472180 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| E3163_RS12255 () | 2472206..2472975 | + | 770 | Protein_2398 | DUF1627 domain-containing protein | - |
| E3163_RS12260 () | 2472991..2473386 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| E3163_RS12265 () | 2473443..2474027 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| E3163_RS12270 () | 2474143..2474247 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| E3163_RS12275 () | 2474436..2474648 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3163_RS12280 () | 2474816..2475094 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| E3163_RS12285 () | 2475096..2476145 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| E3163_RS12290 () | 2476158..2476517 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3163_RS12295 () | 2476514..2477203 | + | 690 | WP_001059381.1 | antiterminator | - |
| E3163_RS12315 () | 2477842..2478270 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| E3163_RS12320 () | 2478267..2478522 | + | 256 | Protein_2408 | DUF3927 family protein | - |
| E3163_RS12325 () | 2478749..2480599 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| E3163_RS12330 () | 2481039..2481254 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E3163_RS12335 () | 2481259..2481603 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| E3163_RS12340 () | 2481654..2482187 | + | 534 | WP_000992137.1 | lysozyme | - |
| E3163_RS12345 () | 2482458..2483027 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E3163_RS12350 () | 2483027..2483173 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| E3163_RS12355 () | 2483181..2483397 | + | 217 | Protein_2415 | endopeptidase | - |
| E3163_RS12360 () | 2483401..2483586 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| E3163_RS12365 () | 2484011..2484238 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| E3163_RS12370 () | 2484280..2484645 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| E3163_RS12375 () | 2484935..2485498 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| E3163_RS12380 () | 2485495..2487156 | + | 1662 | WP_001304106.1 | terminase large subunit | - |
| E3163_RS12385 () | 2487220..2489157 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| E3163_RS12390 () | 2489202..2489423 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| E3163_RS12395 () | 2489369..2491948 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| E3163_RS12400 () | 2491951..2492277 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| E3163_RS12405 () | 2492287..2492637 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| E3163_RS12410 () | 2492634..2493080 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| E3163_RS12415 () | 2493077..2493421 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| E3163_RS12420 () | 2493487..2494203 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| E3163_RS12425 () | 2494218..2494592 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| E3163_RS12430 () | 2494688..2494897 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| E3163_RS12435 () | 2494945..2498187 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| E3163_RS12440 () | 2498180..2498521 | + | 342 | WP_000807954.1 | phage tail protein | - |
| E3163_RS12445 () | 2498521..2499219 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| E3163_RS12450 () | 2499230..2499973 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| E3163_RS12455 () | 2499919..2500551 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| E3163_RS12460 () | 2500893..2502068 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| E3163_RS12465 () | 2502020..2504367 | + | 2348 | Protein_2437 | host specificity protein J | - |
| E3163_RS12470 () | 2504435..2505034 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| E3163_RS12475 () | 2505099..2506322 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E3163_RS12480 () | 2506324..2506593 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| E3163_RS12485 () | 2506707..2507282 | + | 576 | Protein_2441 | hypothetical protein | VF |
| E3163_RS12490 () | 2507993..2508643 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| E3163_RS12495 () | 2508793..2509188 | + | 396 | Protein_2443 | IS256 family transposase ISEic2 | Transposase |
| E3163_RS12500 () | 2509226..2510764 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E3163_RS12505 () | 2510814..2511161 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3163_RS12510 () | 2511158..2511538 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E3163_RS12515 () | 2511633..2512451 | + | 819 | Protein_2447 | IS256 family transposase IS1414 | Transposase |
| E3163_RS12520 () | 2512501..2512743 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| E3163_RS12525 () | 2512921..2513472 | - | 552 | Protein_2449 | hypothetical protein ; Integrase | Integrase |
| E3163_RS12530 () | 2513454..2514698 | - | 1245 | WP_000102123.1 | exonuclease | - |
| E3163_RS12535 () | 2514791..2514979 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| E3163_RS12540 () | 2514976..2515164 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| E3163_RS12545 () | 2515729..2515938 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| E3163_RS12550 () | 2515939..2516577 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| E3163_RS12555 () | 2516589..2516741 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| E3163_RS12560 () | 2517034..2517372 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| E3163_RS12565 () | 2517764..2518006 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| E3163_RS12570 () | 2517990..2518415 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| E3163_RS12575 () | 2518484..2519527 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| E3163_RS12580 () | 2519520..2519981 | + | 462 | WP_000139447.1 | replication protein | - |
| E3163_RS12585 () | 2520015..2520731 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| E3163_RS12590 () | 2520764..2521045 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| E3163_RS12595 () | 2521042..2521269 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| E3163_RS12600 () | 2521262..2521573 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| E3163_RS12605 () | 2521701..2521919 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| E3163_RS12610 () | 2521921..2522478 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| E3163_RS12615 () | 2522712..2522924 | + | 213 | WP_000935259.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3163_RS12620 () | 2523044..2523388 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| E3163_RS12625 () | 2523510..2523782 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| E3163_RS12630 () | 2523784..2524833 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| E3163_RS12635 () | 2524846..2525151 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3163_RS12640 () | 2525214..2525768 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| E3163_RS12645 () | 2525993..2526190 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| E3163_RS12650 () | 2526326..2527039 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| E3163_RS12665 () | 2527490..2527921 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| E3163_RS12670 () | 2527918..2528173 | + | 256 | Protein_2476 | DUF3927 family protein | - |
| E3163_RS12675 () | 2528399..2530249 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| E3163_RS12680 () | 2530688..2530903 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| E3163_RS12685 () | 2530908..2531252 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| E3163_RS12690 () | 2531303..2531836 | + | 534 | WP_000992137.1 | lysozyme | - |
| E3163_RS12695 () | 2532107..2532676 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| E3163_RS12700 () | 2532676..2532822 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| E3163_RS12705 () | 2533045..2533230 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| E3163_RS12710 () | 2533756..2534070 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| E3163_RS12715 () | 2534152..2534376 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| E3163_RS12720 () | 2534763..2535308 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| E3163_RS12725 () | 2535283..2537208 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| E3163_RS12730 () | 2537205..2537411 | + | 207 | WP_000198153.1 | gpW family protein | - |
| E3163_RS12735 () | 2537408..2539009 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| E3163_RS12740 () | 2538990..2540309 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| E3163_RS12745 () | 2540319..2540651 | + | 333 | WP_001295978.1 | head decoration protein | - |
| E3163_RS12750 () | 2540707..2541732 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| E3163_RS12755 () | 2541774..2542172 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| E3163_RS12760 () | 2542184..2542537 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| E3163_RS12765 () | 2542552..2543085 | + | 534 | WP_000975020.1 | phage tail protein | - |
| E3163_RS12770 () | 2543082..2543477 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| E3163_RS12775 () | 2543485..2544237 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| E3163_RS12780 () | 2544251..2544673 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| E3163_RS12785 () | 2544700..2545113 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| E3163_RS12790 () | 2545094..2547706 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| E3163_RS12795 () | 2547703..2548032 | + | 330 | WP_000847298.1 | phage tail protein | - |
| E3163_RS12800 () | 2548032..2548730 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| E3163_RS12805 () | 2548741..2549484 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| E3163_RS12810 () | 2549430..2550059 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| E3163_RS12815 () | 2550300..2553779 | + | 3480 | WP_000514945.1 | host specificity protein J | - |
| E3163_RS12820 () | 2553847..2554446 | + | 600 | WP_001230508.1 | HTH-type transcriptional regulator PuuR | VF |
| E3163_RS12825 () | 2554511..2555734 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E3163_RS12830 () | 2555736..2556005 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| E3163_RS12835 () | 2556119..2556694 | + | 576 | WP_001131658.1 | Putrescine importer PuuP | VF |
| E3163_RS12840 () | 2556767..2557396 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| E3163_RS12845 () | 2557478..2558119 | + | 642 | WP_001143808.1 | Peptide transport periplasmic protein SapA | VF |
| E3163_RS12850 () | 2558281..2558523 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| E3163_RS12855 () | 2558655..2559938 | + | 1284 | WP_000347470.1 | MHS family MFS transporter | - |
| E3163_RS12860 () | 2560027..2561487 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| E3163_RS12865 () | 2561523..2561726 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E3163_RS12870 () | 2561903..2562589 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| E3163_RS12875 () | 2562678..2563424 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.001 |