MGE detailed information
MGE type: Genomic_island MGE length: 22442 bp
Accession: NZ_CP038336 Location: 4787583..4810024 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: chromosome
Accession: NZ_CP038336 Location: 4787583..4810024 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3165_RS23815 () | 4783309..4783851 | + | 543 | WP_000934388.1 | hypothetical protein | - |
| E3165_RS23820 () | 4784144..4786294 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E3165_RS23825 () | 4786344..4786547 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E3165_RS23830 () | 4786558..4787514 | + | 957 | WP_001297640.1 | GTPase | - |
| E3165_RS23835 () | 4787583..4788941 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E3165_RS23840 () | 4788950..4789233 | - | 284 | Protein_4672 | DUF262 domain-containing protein | - |
| E3165_RS23845 () | 4789511..4791943 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E3165_RS23850 () | 4792010..4793479 | + | 1470 | WP_001359936.1 | type I restriction-modification system subunit M | - |
| E3165_RS23855 () | 4793479..4795233 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4795383..4795459 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4795383..4795459 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| E3165_RS23860 () | 4795454..4795795 | + | 342 | WP_000132626.1 | endoribonuclease SymE | Toxin Detail |
| E3165_RS23865 () | 4795842..4797005 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E3165_RS23870 () | 4797053..4797934 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E3165_RS23875 () | 4798031..4798195 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E3165_RS23880 () | 4798372..4799478 | + | 1107 | WP_171877365.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E3165_RS23885 () | 4799398..4800549 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| E3165_RS23890 () | 4800612..4801007 | + | 396 | Protein_4682 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E3165_RS23895 () | 4801250..4801450 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E3165_RS23900 () | 4801425..4802207 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E3165_RS23905 () | 4802674..4803906 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E3165_RS23910 () | 4803947..4805227 | + | 1281 | WP_001037387.1 | DUF445 domain-containing protein | - |
| E3165_RS23915 () | 4805343..4806494 | + | 1152 | WP_001358746.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E3165_RS23920 () | 4806504..4807271 | + | 768 | WP_000222487.1 | hypothetical protein | - |
| E3165_RS23925 () | 4807268..4807534 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E3165_RS23930 () | 4807846..4810024 | + | 2179 | Protein_4690 | Pentapeptide repeat protein Rfr32 | VF |
| E3165_RS23935 () | 4810290..4811132 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E3165_RS23940 () | 4811200..4812378 | + | 1179 | WP_001089433.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.005 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.005 |