MGE detailed information
MGE type: Genomic_island MGE length: 19844 bp
Accession: NZ_CP038336 Location: 4422407..4442250 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: chromosome
Accession: NZ_CP038336 Location: 4422407..4442250 Organism: Escherichia coli O157:H7 strain LSU61 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3165_RS22130 () | 4417434..4417826 | + | 393 | WP_171877358.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E3165_RS22135 () | 4417920..4419324 | + | 1405 | Protein_4340 | IS66 family transposase | - |
| E3165_RS22140 () | 4419282..4420331 | - | 1050 | Protein_4341 | type VI secretion system contractile sheath large subunit | - |
| E3165_RS22145 () | 4420355..4420527 | - | 173 | Protein_4342 | hypothetical protein | - |
| E3165_RS22150 () | 4420873..4421766 | + | 894 | WP_171877359.1 | DNA-processing protein DprA | - |
| E3165_RS22155 () | 4421763..4422389 | + | 627 | WP_171877360.1 | hypothetical protein | - |
| E3165_RS22160 () | 4422407..4424767 | - | 2361 | WP_171877361.1 | DEAD/DEAH box helicase family protein | - |
| E3165_RS22165 () | 4424922..4425485 | - | 564 | WP_171877362.1 | inovirus-type Gp2 protein | - |
| E3165_RS22170 () | 4426493..4427926 | - | 1434 | WP_171877363.1 | DUF3987 domain-containing protein | - |
| E3165_RS22175 () | 4428175..4428414 | - | 240 | WP_171877364.1 | DUF3987 domain-containing protein | - |
| E3165_RS22180 () | 4428520..4428747 | - | 228 | WP_000266639.1 | AlpA family phage regulatory protein | - |
| E3165_RS22185 () | 4429439..4431077 | + | 1639 | Protein_4350 | hypothetical protein | - |
| E3165_RS22190 () | 4431164..4431773 | - | 610 | Protein_4351 | hypothetical protein | - |
| E3165_RS22200 () | 4432274..4433527 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E3165_RS22205 () | 4433539..4434642 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E3165_RS22210 () | 4434930..4435985 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E3165_RS22215 () | 4436024..4436425 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E3165_RS22220 () | 4436483..4437727 | - | 1245 | WP_000189550.1 | esterase FrsA | - |
| - () | 4437143..4437223 | - | 81 | NuclAT_11 | - | - |
| - () | 4437143..4437223 | - | 81 | NuclAT_11 | - | - |
| - () | 4437143..4437223 | - | 81 | NuclAT_11 | - | - |
| - () | 4437143..4437223 | - | 81 | NuclAT_11 | - | - |
| E3165_RS22225 () | 4437819..4438277 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E3165_RS22230 () | 4438538..4439995 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E3165_RS22235 () | 4440052..4440609 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E3165_RS22240 () | 4440521..4440787 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E3165_RS22245 () | 4441094..4441546 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E3165_RS22250 () | 4441556..4441954 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E3165_RS22255 () | 4441957..4442250 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E3165_RS22260 () | 4442302..4443357 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| E3165_RS22265 () | 4443428..4444213 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| E3165_RS22270 () | 4444158..4445897 | + | 1740 | WP_001301901.1 | flagellar biosynthesis protein FlhA | - |
| E3165_RS22275 () | 4446042..4446539 | - | 498 | Protein_4367 | REP-associated tyrosine transposase RayT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|