MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92495 bp
Accession: NZ_CP038332 Location: 1..92495 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: plasmid pNE1092-1
Accession: NZ_CP038332 Location: 1..92495 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: plasmid pNE1092-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U73_RS28605 () | 1..978 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E4U73_RS28610 () | 1263..2003 | - | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| E4U73_RS28615 () | 2124..2354 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U73_RS28620 () | 2485..2977 | - | 493 | Protein_3 | MarR family transcriptional regulator | - |
| E4U73_RS28625 () | 3098..4537 | - | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| E4U73_RS28630 () | 4541..6661 | - | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| E4U73_RS28635 () | 6711..9707 | - | 2997 | WP_000217739.1 | enterohemolysin EhxA | - |
| E4U73_RS28640 () | 9709..10224 | - | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| E4U73_RS28645 () | 10765..11936 | - | 1172 | Protein_8 | IS3 family transposase | - |
| E4U73_RS28650 () | 12115..12516 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U73_RS28655 () | 12608..13441 | - | 834 | WP_000096786.1 | A24 family peptidase | - |
| E4U73_RS28660 () | 13499..14011 | - | 513 | WP_001004187.1 | type II secretion system protein M | - |
| E4U73_RS28665 () | 13998..15170 | - | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| E4U73_RS28670 () | 15209..16186 | - | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| E4U73_RS28675 () | 16183..16782 | - | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| E4U73_RS28680 () | 16779..17126 | - | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| E4U73_RS28685 () | 17141..17695 | - | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| E4U73_RS28690 () | 17692..18126 | - | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| E4U73_RS28695 () | 18157..19380 | - | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| E4U73_RS28700 () | 19382..20887 | - | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| E4U73_RS28705 () | 20887..22854 | - | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| E4U73_RS28710 () | 22855..23730 | - | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| E4U73_RS28715 () | 23817..26513 | - | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| E4U73_RS28720 () | 26962..27048 | + | 87 | Protein_23 | transposase | - |
| E4U73_RS28725 () | 27170..27550 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| E4U73_RS28730 () | 27547..27894 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| E4U73_RS28735 () | 27944..29482 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| E4U73_RS28740 () | 29843..30841 | - | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| E4U73_RS28745 () | 30915..32636 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U73_RS28750 () | 32726..33832 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U73_RS28755 () | 33832..34653 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U73_RS28760 () | 36095..36576 | + | 482 | Protein_31 | IS1 family transposase | - |
| E4U73_RS28765 () | 36832..40734 | - | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| E4U73_RS28770 () | 40859..41847 | - | 989 | Protein_33 | IS3 family transposase | - |
| E4U73_RS28775 () | 41904..42293 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U73_RS28780 () | 42337..44547 | - | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| E4U73_RS28785 () | 44724..44909 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| E4U73_RS28790 () | 44909..45325 | + | 417 | Protein_37 | transposase zinc-binding domain-containing protein | - |
| E4U73_RS28795 () | 45325..45891 | + | 567 | Protein_38 | IS3-like element IS600 family transposase | - |
| E4U73_RS28800 () | 45935..46150 | + | 216 | Protein_39 | transposase | - |
| E4U73_RS28805 () | 46250..46456 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U73_RS28810 () | 46551..46826 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U73_RS28815 () | 46826..47110 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U73_RS28820 () | 48022..48879 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U73_RS28825 () | 48872..48946 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U73_RS28830 () | 49182..49436 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U73_RS28835 () | 49676..50014 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U73_RS28840 () | 50052..50261 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U73_RS28845 () | 50307..50768 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U73_RS28850 () | 51013..51225 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U73_RS28855 () | 51358..51918 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U73_RS28860 () | 52021..52881 | - | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| E4U73_RS28865 () | 52940..53686 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U73_RS28870 () | 53706..55094 | - | 1389 | Protein_53 | conjugal transfer nickase/helicase TraI | - |
| E4U73_RS28875 () | 55151..55402 | + | 252 | Protein_54 | transposase | - |
| E4U73_RS28880 () | 55409..55654 | + | 246 | Protein_55 | ATP-binding protein | - |
| E4U73_RS28885 () | 55647..55871 | - | 225 | Protein_56 | IS3 family transposase | - |
| E4U73_RS28890 () | 55945..65454 | - | 9510 | WP_001694356.1 | toxin B | - |
| E4U73_RS28895 () | 65561..65713 | - | 153 | Protein_58 | IS1 family transposase | - |
| E4U73_RS28900 () | 65674..65830 | - | 157 | Protein_59 | ATP-binding protein | - |
| E4U73_RS28905 () | 65870..66133 | - | 264 | Protein_60 | IS21 family transposase | - |
| E4U73_RS28910 () | 66227..66576 | + | 350 | Protein_61 | IS3 family transposase | - |
| E4U73_RS28915 () | 67241..67672 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U73_RS28920 () | 67740..69761 | - | 2022 | Protein_63 | relaxase/mobilization nuclease domain-containing protein | - |
| E4U73_RS28925 () | 69895..70053 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 70118..70316 | - | 199 | NuclAT_0 | - | - |
| - () | 70118..70316 | - | 199 | NuclAT_0 | - | - |
| - () | 70118..70316 | - | 199 | NuclAT_0 | - | - |
| - () | 70118..70316 | - | 199 | NuclAT_0 | - | - |
| E4U73_RS28930 () | 70285..71046 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| E4U73_RS28935 () | 71043..71477 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U73_RS28940 () | 71532..73490 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U73_RS28945 () | 73556..73789 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U73_RS28950 () | 73846..74298 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U73_RS28955 () | 74324..74530 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U73_RS28960 () | 74600..75037 | + | 438 | WP_001310283.1 | hypothetical protein | - |
| E4U73_RS28965 () | 75123..75686 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U73_RS28970 () | 75733..77094 | - | 1362 | WP_000199441.1 | DUF3560 domain-containing protein | - |
| E4U73_RS28975 () | 77146..77376 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U73_RS28980 () | 77864..78253 | - | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U73_RS28985 () | 78372..78563 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U73_RS28990 () | 78560..78982 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U73_RS28995 () | 79029..79331 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U73_RS29000 () | 79427..79999 | - | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U73_RS29005 () | 80315..80648 | - | 334 | Protein_80 | hypothetical protein | - |
| E4U73_RS29010 () | 80694..81248 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U73_RS29015 () | 81142..81363 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U73_RS29020 () | 81364..82047 | - | 684 | WP_000085945.1 | DNA methylase | - |
| E4U73_RS29025 () | 82124..82429 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U73_RS29030 () | 82433..83335 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U73_RS29035 () | 83987..84958 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U73_RS29040 () | 84958..86124 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| E4U73_RS29045 () | 86864..88077 | + | 1214 | WP_162829202.1 | IS3 family transposase | - |
| E4U73_RS29050 () | 88800..89606 | - | 807 | WP_000016990.1 | site-specific integrase | - |
| E4U73_RS29055 () | 89607..89912 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| E4U73_RS29060 () | 89914..90132 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| E4U73_RS29065 () | 90591..91274 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U73_RS29070 () | 91271..91891 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U73_RS29075 () | 91888..92088 | + | 201 | WP_000708307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|