MGE detailed information
MGE type: Conjugative plasmid MGE length: 93970 bp
Accession: NZ_CP038330 Location: 1..93970 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: plasmid pNE1092-3
Accession: NZ_CP038330 Location: 1..93970 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: plasmid pNE1092-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U73_RS27965 () | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| E4U73_RS27970 () | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| E4U73_RS27975 () | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| E4U73_RS27980 () | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| E4U73_RS27985 () | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| E4U73_RS27990 () | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| E4U73_RS27995 () | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| E4U73_RS28000 () | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| E4U73_RS28005 () | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| E4U73_RS28010 () | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| E4U73_RS28015 () | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| E4U73_RS28020 () | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| E4U73_RS28025 () | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| E4U73_RS28030 () | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| E4U73_RS28035 () | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| E4U73_RS28040 () | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| E4U73_RS28045 () | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| E4U73_RS28050 () | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| E4U73_RS28055 () | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| E4U73_RS28060 () | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| E4U73_RS28065 () | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U73_RS28070 () | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| E4U73_RS28075 () | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| E4U73_RS28080 () | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| E4U73_RS28085 () | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| E4U73_RS28090 () | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| E4U73_RS28095 () | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| E4U73_RS28100 () | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| E4U73_RS28105 () | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4U73_RS28110 () | 18776..18955 | - | 180 | Protein_30 | helix-turn-helix transcriptional regulator | - |
| E4U73_RS28115 () | 19262..19966 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4U73_RS28120 () | 20121..21038 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| E4U73_RS28125 () | 21022..21648 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| E4U73_RS28130 () | 21645..21926 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| E4U73_RS28135 () | 22071..22448 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| E4U73_RS28140 () | 22772..23434 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| E4U73_RS28145 () | 23434..23811 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| E4U73_RS28150 () | 23821..24267 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| E4U73_RS28155 () | 24277..24906 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| E4U73_RS28160 () | 24863..25447 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| E4U73_RS28165 () | 25458..27323 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| E4U73_RS28170 () | 27320..30292 | - | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| E4U73_RS28175 () | 30460..31077 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| E4U73_RS28180 () | 31059..31292 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| E4U73_RS28185 () | 31292..33484 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| E4U73_RS28190 () | 33499..33987 | + | 489 | WP_000467110.1 | hypothetical protein | - |
| E4U73_RS28195 () | 34078..34377 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| E4U73_RS28200 () | 34589..35206 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| E4U73_RS28205 () | 35262..35918 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| E4U73_RS28210 () | 35918..37345 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| E4U73_RS28215 () | 37349..37849 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| E4U73_RS28220 () | 37858..38169 | - | 312 | WP_001447539.1 | hypothetical protein | - |
| E4U73_RS28225 () | 38175..38606 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| E4U73_RS28230 () | 38674..39348 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| E4U73_RS28235 () | 39323..39604 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| E4U73_RS28240 () | 39597..39974 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| E4U73_RS28245 () | 40301..40444 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| E4U73_RS28250 () | 40536..41171 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| E4U73_RS28255 () | 41224..41496 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| E4U73_RS28260 () | 41545..42726 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U73_RS28265 () | 42730..43515 | - | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| E4U73_RS28270 () | 43689..44000 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| E4U73_RS28275 () | 44307..45122 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| E4U73_RS28280 () | 45183..45986 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| E4U73_RS28285 () | 45986..46822 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| E4U73_RS28290 () | 47128..47370 | + | 243 | WP_000844627.1 | transposase | - |
| E4U73_RS28295 () | 47402..48052 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| E4U73_RS28300 () | 48158..49357 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| E4U73_RS28305 () | 49324..49512 | - | 189 | Protein_69 | IS91 family transposase | - |
| E4U73_RS28310 () | 49624..49929 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| E4U73_RS28315 () | 49957..51171 | - | 1215 | WP_001694495.1 | Inner membrane transport protein YdhC | ARG |
| E4U73_RS28320 () | 51388..52272 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| E4U73_RS28325 () | 52303..53796 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| E4U73_RS28330 () | 54007..54231 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| E4U73_RS28335 () | 54228..54965 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E4U73_RS28340 () | 55451..55591 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| E4U73_RS28345 () | 55597..56301 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E4U73_RS28350 () | 56364..57068 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| E4U73_RS28355 () | 57131..57835 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| E4U73_RS28360 () | 58045..59034 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
| E4U73_RS28365 () | 59031..59267 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| E4U73_RS28370 () | 59264..59629 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| E4U73_RS28375 () | 59741..60379 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| E4U73_RS28380 () | 60394..62079 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| E4U73_RS28385 () | 62151..62426 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| E4U73_RS28390 () | 62442..62792 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| E4U73_RS28395 () | 62864..63298 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| E4U73_RS28400 () | 63398..64402 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| E4U73_RS28405 () | 64679..64798 | + | 120 | Protein_89 | permease | - |
| E4U73_RS28410 () | 64808..64924 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| E4U73_RS28415 () | 65045..65419 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| E4U73_RS28420 () | 65533..66258 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| E4U73_RS28425 () | 66391..70644 | + | 4254 | WP_001257735.1 | RHS repeat protein | - |
| E4U73_RS28430 () | 70616..71056 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| E4U73_RS28435 () | 71227..71679 | + | 453 | Protein_95 | hypothetical protein | - |
| E4U73_RS28440 () | 71695..72297 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| E4U73_RS28445 () | 72575..72856 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| E4U73_RS28450 () | 73155..73691 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| E4U73_RS28455 () | 73694..74704 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| E4U73_RS28460 () | 74709..75578 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| E4U73_RS28465 () | 75575..76066 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| E4U73_RS28470 () | 76393..77268 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| E4U73_RS28475 () | 77430..78470 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| E4U73_RS28480 () | 78757..80268 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| E4U73_RS28485 () | 80379..81419 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| E4U73_RS28490 () | 81421..82407 | + | 987 | Protein_106 | conjugal transfer protein TraH | - |
| E4U73_RS28495 () | 82464..83677 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4U73_RS28500 () | 83721..84167 | + | 447 | Protein_108 | conjugal transfer protein TraH | - |
| E4U73_RS28505 () | 84180..87794 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| E4U73_RS28510 () | 87832..88194 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| E4U73_RS28515 () | 88910..89182 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| E4U73_RS28520 () | 89182..89715 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| E4U73_RS28525 () | 89726..90334 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| E4U73_RS28530 () | 90331..90882 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| E4U73_RS28535 () | 90942..91361 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| E4U73_RS28540 () | 91363..91656 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| E4U73_RS28545 () | 91673..92656 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| E4U73_RS28550 () | 93155..93694 | + | 540 | WP_001447712.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|