MGE detailed information
MGE type: Genomic_island MGE length: 21150 bp
Accession: NZ_CP038328 Location: 4870250..4891399 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: chromosome
Accession: NZ_CP038328 Location: 4870250..4891399 Organism: Escherichia coli O157:H7 strain NE 1092-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U73_RS24515 () | 4865976..4866518 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| E4U73_RS24520 () | 4866811..4868961 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| E4U73_RS24525 () | 4869011..4869214 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| E4U73_RS24530 () | 4869225..4870181 | + | 957 | WP_001297640.1 | GTPase | - |
| E4U73_RS24535 () | 4870250..4871608 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| E4U73_RS24540 () | 4871617..4871901 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| E4U73_RS24545 () | 4872179..4874611 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| E4U73_RS24550 () | 4874678..4876147 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| E4U73_RS24555 () | 4876147..4877901 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4878051..4878127 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4878051..4878127 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| E4U73_RS24560 () | 4878122..4878463 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| E4U73_RS24565 () | 4878510..4879673 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| E4U73_RS24570 () | 4879721..4880602 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| E4U73_RS24575 () | 4880699..4880863 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| E4U73_RS24580 () | 4881040..4882452 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| E4U73_RS24585 () | 4882695..4882895 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| E4U73_RS24590 () | 4882870..4883652 | - | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| E4U73_RS24595 () | 4884119..4885351 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| E4U73_RS24600 () | 4885392..4886663 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| E4U73_RS24605 () | 4886779..4887930 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| E4U73_RS24610 () | 4887940..4888707 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| E4U73_RS24615 () | 4888704..4888970 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| E4U73_RS24620 () | 4889282..4891399 | + | 2118 | WP_000535065.1 | hypothetical protein | VF |
| E4U73_RS24625 () | 4891665..4892507 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| E4U73_RS24630 () | 4892575..4893753 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |