MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95338 bp
Accession: NZ_CP038320 Location: 1..95338 Organism: Escherichia coli O157:H7 strain NE122 Replicon: plasmid pNE122-1
Accession: NZ_CP038320 Location: 1..95338 Organism: Escherichia coli O157:H7 strain NE122 Replicon: plasmid pNE122-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3167_RS26830 () | 2589..3464 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| E3167_RS26835 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3167_RS26840 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3167_RS26845 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E3167_RS26850 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3167_RS26855 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3167_RS26860 () | 9193..9540 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3167_RS26865 () | 9537..10136 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3167_RS26870 () | 10133..11110 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E3167_RS26875 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3167_RS26880 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3167_RS26885 () | 12878..13711 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3167_RS26890 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3167_RS26895 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E3167_RS26900 () | 16095..16610 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3167_RS26905 () | 16612..19608 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| E3167_RS26910 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3167_RS26915 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3167_RS26920 () | 23288..23482 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| E3167_RS26925 () | 23672..24052 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS26930 () | 24049..24396 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS26935 () | 24446..25984 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS26940 () | 26022..26284 | + | 263 | Protein_23 | MarR family transcriptional regulator | - |
| E3167_RS26945 () | 26415..26645 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E3167_RS26950 () | 26766..27506 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E3167_RS26955 () | 27791..28768 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3167_RS26960 () | 29176..29376 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E3167_RS26965 () | 29373..29993 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E3167_RS26970 () | 29990..30673 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3167_RS26975 () | 31132..31350 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3167_RS26980 () | 31352..31657 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3167_RS26985 () | 31658..32464 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E3167_RS26995 () | 34454..34816 | + | 363 | Protein_34 | RepB family plasmid replication initiator protein | - |
| E3167_RS27000 () | 35404..36570 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3167_RS27005 () | 36570..37541 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3167_RS27010 () | 38279..39181 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E3167_RS27015 () | 39185..39490 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E3167_RS27020 () | 39567..40250 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E3167_RS27025 () | 40251..40472 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E3167_RS27030 () | 40366..40920 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3167_RS27035 () | 40966..41299 | + | 334 | Protein_42 | hypothetical protein | - |
| E3167_RS27040 () | 41615..42187 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3167_RS27045 () | 42283..42585 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E3167_RS27050 () | 42632..43054 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3167_RS27055 () | 43051..43242 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E3167_RS27060 () | 43361..43750 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E3167_RS27065 () | 44238..44468 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E3167_RS27070 () | 44520..45881 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E3167_RS27075 () | 45928..46491 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3167_RS27080 () | 46577..47026 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| E3167_RS27085 () | 47096..47302 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E3167_RS27090 () | 47328..47780 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3167_RS27095 () | 47837..48070 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3167_RS27100 () | 48136..50094 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E3167_RS27105 () | 50149..50583 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3167_RS27110 () | 50580..51341 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 51310..51508 | + | 199 | NuclAT_0 | - | - |
| - () | 51310..51508 | + | 199 | NuclAT_0 | - | - |
| - () | 51310..51508 | + | 199 | NuclAT_0 | - | - |
| - () | 51310..51508 | + | 199 | NuclAT_0 | - | - |
| E3167_RS27115 () | 51573..51731 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E3167_RS27120 () | 51865..53886 | + | 2022 | Protein_59 | hypothetical protein | Relaxase |
| E3167_RS27125 () | 53954..54385 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E3167_RS27130 () | 55029..55378 | - | 350 | Protein_61 | IS3 family transposase IS3H | Transposase |
| E3167_RS27135 () | 55472..55735 | + | 264 | Protein_62 | IS21 family transposase ISEc62 | Transposase |
| E3167_RS27140 () | 55775..55931 | + | 157 | Protein_63 | IS21 family transposase ISEc62 | Transposase |
| E3167_RS27145 () | 55892..56044 | + | 153 | Protein_64 | IS1 family transposase | - |
| E3167_RS27150 () | 56151..65660 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| E3167_RS27155 () | 65734..65958 | + | 225 | Protein_66 | IS3 family transposase IS3H | Transposase |
| E3167_RS27160 () | 65951..66196 | - | 246 | Protein_67 | IS3 family transposase IS1203 | Transposase |
| E3167_RS27165 () | 66203..66454 | - | 252 | Protein_68 | IS3 family transposase IS1203 | Transposase |
| E3167_RS27170 () | 66511..67899 | + | 1389 | Protein_69 | Multifunctional conjugation protein TraI | Relaxase |
| E3167_RS27175 () | 67919..68665 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E3167_RS27180 () | 68724..69584 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E3167_RS27185 () | 69687..70247 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E3167_RS27190 () | 70380..70592 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E3167_RS27195 () | 70837..71298 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| E3167_RS27200 () | 71344..71553 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E3167_RS27205 () | 71591..71929 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E3167_RS27210 () | 72169..72423 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E3167_RS27215 () | 72659..72733 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E3167_RS27220 () | 72726..73583 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E3167_RS27225 () | 74495..74779 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E3167_RS27230 () | 74779..75054 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3167_RS27235 () | 75149..75355 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E3167_RS27240 () | 75455..75670 | - | 216 | Protein_83 | transposase | - |
| E3167_RS27245 () | 75714..76280 | - | 567 | Protein_84 | IS3 family transposase ISSd1 | Transposase |
| E3167_RS27250 () | 76280..76696 | - | 417 | Protein_85 | transposase zinc-binding domain-containing protein | - |
| E3167_RS27255 () | 76696..76881 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| E3167_RS27260 () | 77058..79268 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E3167_RS27265 () | 79312..79701 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E3167_RS27270 () | 79758..80746 | + | 989 | Protein_89 | IS3 family transposase IS629 | Transposase |
| E3167_RS27275 () | 80927..84829 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| E3167_RS27280 () | 85085..85566 | - | 482 | Protein_91 | IS1 family transposase IS1N | Transposase |
| E3167_RS27285 () | 87008..87829 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3167_RS27290 () | 87829..88935 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3167_RS27295 () | 89025..90746 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3167_RS27300 () | 90820..91818 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3167_RS27305 () | 91871..92059 | + | 189 | Protein_96 | hypothetical protein | - |
| E3167_RS27310 () | 92186..92566 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS27315 () | 92563..92910 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS27320 () | 92960..94498 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E3167_RS27325 () | 94613..94699 | - | 87 | Protein_100 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|