MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37590 bp
Accession: NZ_CP038303 Location: 1..37590 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: plasmid pTX313-2
Accession: NZ_CP038303 Location: 1..37590 Organism: Escherichia coli O157:H7 strain SS TX 313-1 Replicon: plasmid pTX313-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U66_RS28245 () | 732..1391 | - | 660 | WP_000516225.1 | peptidyl-arginine deiminase | - |
| E4U66_RS28250 () | 1506..2321 | - | 816 | WP_000018884.1 | Tyrosine recombinase XerD | VF |
| E4U66_RS28255 () | 2981..3229 | + | 249 | WP_000312658.1 | hypothetical protein | - |
| E4U66_RS28260 () | 3441..3734 | - | 294 | WP_000717995.1 | hypothetical protein | - |
| E4U66_RS28265 () | 3763..4131 | - | 369 | WP_001166027.1 | transcriptional regulator | - |
| E4U66_RS28270 () | 4137..4439 | - | 303 | WP_000691019.1 | type II toxin-antitoxin system HigB family toxin | - |
| E4U66_RS28275 () | 4929..5444 | - | 516 | WP_000528103.1 | hypothetical protein | - |
| E4U66_RS28280 () | 5811..6161 | + | 351 | WP_000438384.1 | hypothetical protein | - |
| E4U66_RS28285 () | 6245..6754 | + | 510 | WP_000190058.1 | hypothetical protein | - |
| E4U66_RS28290 () | 6860..8761 | + | 1902 | WP_000407094.1 | AAA family ATPase | - |
| E4U66_RS28295 () | 9148..9327 | - | 180 | WP_000347021.1 | hypothetical protein | - |
| E4U66_RS28300 () | 9941..10237 | - | 297 | WP_000753308.1 | hypothetical protein | - |
| E4U66_RS28305 () | 10564..10749 | - | 186 | WP_000425267.1 | hypothetical protein | - |
| E4U66_RS28310 () | 10912..13068 | - | 2157 | WP_001235739.1 | type IA DNA topoisomerase | - |
| E4U66_RS28315 () | 13080..13667 | - | 588 | WP_000280693.1 | hypothetical protein | - |
| E4U66_RS28320 () | 13808..14113 | - | 306 | WP_001223992.1 | IncN plasmid KikA protein | - |
| E4U66_RS28325 () | 14129..16096 | - | 1968 | WP_000726944.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E4U66_RS28330 () | 16147..17166 | - | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| E4U66_RS28335 () | 17166..18308 | - | 1143 | WP_000787411.1 | Type IV secretion system protein virB10 | VF |
| E4U66_RS28340 () | 18298..19077 | - | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| E4U66_RS28345 () | 19074..19811 | - | 738 | WP_000364523.1 | Type IV secretion system protein PtlE | VF |
| E4U66_RS28350 () | 19942..22314 | - | 2373 | WP_001195524.1 | VirB4 family type IV secretion system protein | - |
| E4U66_RS28355 () | 22317..22637 | - | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| E4U66_RS28360 () | 22695..22988 | - | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| E4U66_RS28365 () | 22981..23592 | - | 612 | WP_000603937.1 | Type IV secretion system protein virB1 | VF |
| E4U66_RS28370 () | 23925..24920 | + | 996 | WP_001103652.1 | type IV secretion system protein | - |
| E4U66_RS28375 () | 24922..25563 | + | 642 | WP_000844300.1 | conjugal transfer protein TrbJ | - |
| E4U66_RS28380 () | 25576..25809 | + | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| E4U66_RS28385 () | 25850..26137 | - | 288 | WP_000332251.1 | helix-turn-helix transcriptional regulator | - |
| E4U66_RS28390 () | 26336..26674 | + | 339 | WP_000612441.1 | hypothetical protein | VF |
| E4U66_RS28395 () | 27026..28030 | - | 1005 | WP_001208090.1 | replication initiation protein | - |
| E4U66_RS28400 () | 29710..30039 | + | 330 | WP_000855123.1 | hypothetical protein | - |
| E4U66_RS28405 () | 30097..30375 | + | 279 | WP_000545933.1 | hypothetical protein | - |
| E4U66_RS28410 () | 30810..30992 | + | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| E4U66_RS28415 () | 31017..31454 | + | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| E4U66_RS28420 () | 31483..32187 | - | 705 | WP_001279862.1 | hypothetical protein | - |
| E4U66_RS28425 () | 32184..32945 | - | 762 | WP_001097938.1 | conjugal transfer protein TraL | - |
| E4U66_RS28430 () | 32955..33362 | - | 408 | WP_001190621.1 | hypothetical protein | - |
| E4U66_RS28435 () | 33708..34043 | + | 336 | WP_000963832.1 | hypothetical protein | Relaxase |
| E4U66_RS28440 () | 34040..37237 | + | 3198 | WP_000586931.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|