MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70894 bp
Accession: NZ_CP038299 Location: 1..70894 Organism: Escherichia coli O157:H7 strain TB182A Replicon: plasmid pTB182A-5
Accession: NZ_CP038299 Location: 1..70894 Organism: Escherichia coli O157:H7 strain TB182A Replicon: plasmid pTB182A-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3171_RS25570 () | 265..540 | - | 276 | WP_000234737.1 | hypothetical protein | - |
| E3171_RS25575 () | 1156..1539 | - | 384 | WP_001137411.1 | relaxosome protein TraM | - |
| E3171_RS25580 () | 2009..2515 | + | 507 | WP_001398583.1 | transglycosylase SLT domain-containing protein | - |
| E3171_RS25585 () | 2813..3634 | - | 822 | WP_001398584.1 | DUF945 domain-containing protein | - |
| E3171_RS25590 () | 3744..4040 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| E3171_RS25595 () | 4266..4457 | - | 192 | WP_072172822.1 | hypothetical protein | - |
| E3171_RS25600 () | 4987..5229 | - | 243 | WP_001398403.1 | hypothetical protein | - |
| E3171_RS25605 () | 5288..5611 | - | 324 | WP_001398404.1 | hypothetical protein | - |
| E3171_RS25610 () | 5833..6027 | - | 195 | WP_032144808.1 | hypothetical protein | - |
| E3171_RS25615 () | 6503..6664 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 6730..6913 | - | 184 | NuclAT_0 | - | - |
| - () | 6730..6913 | - | 184 | NuclAT_0 | - | - |
| - () | 6730..6913 | - | 184 | NuclAT_0 | - | - |
| - () | 6730..6913 | - | 184 | NuclAT_0 | - | - |
| E3171_RS25620 () | 6872..7186 | - | 315 | WP_000872082.1 | hypothetical protein | - |
| E3171_RS25625 () | 7183..7692 | - | 510 | WP_001398553.1 | hypothetical protein | - |
| E3171_RS25630 () | 7692..8411 | - | 720 | WP_001404319.1 | plasmid SOS inhibition protein A | - |
| E3171_RS25635 () | 8408..8842 | - | 435 | WP_000845967.1 | conjugation system SOS inhibitor PsiB | - |
| E3171_RS25640 () | 8897..10864 | - | 1968 | WP_001404320.1 | ParB/RepB/Spo0J family partition protein | - |
| E3171_RS25645 () | 10928..11161 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| E3171_RS25650 () | 11217..11744 | - | 528 | WP_001404321.1 | single-stranded DNA-binding protein | - |
| E3171_RS25655 () | 11809..12045 | + | 237 | WP_001337416.1 | hypothetical protein | - |
| E3171_RS25660 () | 12582..13145 | - | 564 | WP_001404383.1 | class I SAM-dependent methyltransferase | - |
| E3171_RS25665 () | 13191..14552 | - | 1362 | WP_000170668.1 | DUF3560 domain-containing protein | - |
| E3171_RS25670 () | 14604..14834 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| E3171_RS25675 () | 15095..15352 | + | 258 | WP_001367298.1 | hypothetical protein | - |
| E3171_RS25680 () | 15512..15835 | + | 324 | WP_071596373.1 | pilus assembly protein | - |
| E3171_RS25685 () | 15805..15996 | - | 192 | WP_001415419.1 | hypothetical protein | - |
| E3171_RS25690 () | 15993..16415 | - | 423 | WP_000271732.1 | DUF1380 family protein | - |
| E3171_RS25695 () | 16462..16764 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| E3171_RS25700 () | 16860..17328 | - | 469 | Protein_26 | DUF1472 domain-containing protein | - |
| E3171_RS25705 () | 17303..18073 | - | 771 | WP_001006244.1 | hypothetical protein | - |
| E3171_RS25710 () | 18118..18552 | - | 435 | WP_000274496.1 | DUF1380 family protein | - |
| E3171_RS25715 () | 18566..18787 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| E3171_RS25720 () | 18788..19471 | - | 684 | WP_000086118.1 | DNA methylase | - |
| E3171_RS25725 () | 19547..19859 | - | 313 | Protein_31 | hypothetical protein | - |
| E3171_RS25730 () | 19856..20758 | - | 903 | WP_001513647.1 | DUF1281 domain-containing protein | - |
| E3171_RS25735 () | 21293..22255 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| E3171_RS25740 () | 22258..22608 | + | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| E3171_RS25745 () | 22717..23136 | + | 420 | WP_024181414.1 | hypothetical protein | - |
| E3171_RS25750 () | 23071..23952 | - | 882 | WP_000005461.1 | hypothetical protein | - |
| E3171_RS25755 () | 24425..25129 | - | 705 | WP_171878554.1 | IS6-like element IS26 family transposase | - |
| E3171_RS25760 () | 25278..25682 | + | 405 | Protein_38 | IS91 family transposase | - |
| E3171_RS25765 () | 25789..26625 | - | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| E3171_RS25770 () | 26625..27428 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| E3171_RS25775 () | 27489..28304 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| E3171_RS25780 () | 28641..28844 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| E3171_RS25785 () | 28835..29056 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| E3171_RS25790 () | 29291..29620 | - | 330 | WP_001415369.1 | hypothetical protein | - |
| E3171_RS25795 () | 29807..30667 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| E3171_RS25800 () | 30958..31662 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| E3171_RS25805 () | 31758..32267 | + | 510 | WP_000571065.1 | trimethoprim-resistant dihydrofolate reductase DfrA8 | - |
| E3171_RS25810 () | 32264..32920 | + | 657 | WP_000144779.1 | metallophosphoesterase | - |
| E3171_RS25815 () | 32957..33661 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| E3171_RS25820 () | 33748..34128 | - | 381 | WP_001696636.1 | HTH domain-containing protein | - |
| E3171_RS25825 () | 34570..35493 | - | 924 | WP_001415483.1 | hypothetical protein | - |
| E3171_RS25830 () | 35541..35705 | - | 165 | WP_001388374.1 | hypothetical protein | Toxin Detail |
| E3171_RS25835 () | 35702..35971 | - | 270 | WP_000079939.1 | hypothetical protein | Antitoxin Detail |
| E3171_RS25840 () | 36044..36184 | - | 141 | WP_001404367.1 | hypothetical protein | - |
| E3171_RS25845 () | 36898..37920 | - | 1023 | WP_032268691.1 | replication initiation protein | - |
| E3171_RS25850 () | 37913..37987 | - | 75 | WP_071703955.1 | RepA leader peptide Tap | - |
| E3171_RS25855 () | 38223..38480 | - | 258 | WP_047648528.1 | replication regulatory protein RepA | - |
| E3171_RS25860 () | 39037..39267 | - | 231 | WP_170867393.1 | hypothetical protein | - |
| E3171_RS25865 () | 39600..40613 | - | 1014 | WP_001404372.1 | hypothetical protein | - |
| E3171_RS25870 () | 40720..41028 | - | 309 | WP_000636894.1 | hypothetical protein | - |
| E3171_RS25875 () | 41025..41735 | - | 711 | WP_000007775.1 | hypothetical protein | - |
| E3171_RS25880 () | 41732..42085 | - | 354 | WP_001404373.1 | hypothetical protein | - |
| E3171_RS25885 () | 42127..42858 | - | 732 | WP_001404374.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3171_RS25890 () | 42855..43421 | - | 567 | WP_024169127.1 | DUF2726 domain-containing protein | - |
| E3171_RS25895 () | 43439..48736 | - | 5298 | WP_001415484.1 | conjugative transfer relaxase/helicase TraI | - |
| E3171_RS25900 () | 48736..50967 | - | 2232 | WP_000056170.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3171_RS25905 () | 51111..51848 | - | 738 | WP_001404422.1 | complement resistance protein TraT | - |
| E3171_RS25910 () | 51992..52252 | - | 261 | WP_001404421.1 | hypothetical protein | - |
| E3171_RS25915 () | 52578..55466 | - | 2889 | WP_001404420.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3171_RS25920 () | 55468..56829 | - | 1362 | WP_001237467.1 | F-type conjugal transfer protein TraH | - |
| E3171_RS25925 () | 56835..57437 | - | 603 | WP_000906492.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3171_RS25930 () | 57461..58240 | - | 780 | WP_001404419.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3171_RS25935 () | 58237..60075 | - | 1839 | WP_001404418.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3171_RS25940 () | 60072..60686 | - | 615 | WP_001731111.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3171_RS25945 () | 60683..61051 | - | 369 | WP_001398577.1 | hypothetical protein | - |
| E3171_RS25950 () | 61062..62048 | - | 987 | WP_001083236.1 | conjugal transfer pilus assembly protein TraU | - |
| E3171_RS25955 () | 62045..62680 | - | 636 | WP_001398578.1 | type-F conjugative transfer system protein TraW | - |
| E3171_RS25960 () | 62680..63144 | - | 465 | WP_001404415.1 | type-F conjugative transfer system protein TrbI | - |
| E3171_RS25965 () | 63141..65732 | - | 2592 | WP_000714172.1 | type IV secretion system protein TraC | - |
| E3171_RS25970 () | 65743..66342 | - | 600 | WP_000724374.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3171_RS25975 () | 66402..66812 | - | 411 | WP_000210715.1 | hypothetical protein | - |
| E3171_RS25980 () | 66796..66981 | - | 186 | WP_000797318.1 | hypothetical protein | - |
| E3171_RS25985 () | 66985..67209 | - | 225 | WP_000786056.1 | TraR/DksA C4-type zinc finger protein | - |
| E3171_RS25990 () | 67321..68685 | - | 1365 | WP_000024505.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3171_RS25995 () | 68672..69412 | - | 741 | WP_000794311.1 | type-F conjugative transfer system secretin TraK | - |
| E3171_RS26000 () | 69402..69965 | - | 564 | WP_000406020.1 | type IV conjugative transfer system protein TraE | - |
| E3171_RS26005 () | 69985..70290 | - | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| E3171_RS26010 () | 70292..70651 | - | 360 | WP_001054220.1 | type IV conjugative transfer system pilin TraA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|