MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96920 bp
Accession: NZ_CP038289 Location: 1..96920 Organism: Escherichia coli O157:H7 strain TX 376-2 Replicon: plasmid pTX376-1
Accession: NZ_CP038289 Location: 1..96920 Organism: Escherichia coli O157:H7 strain TX 376-2 Replicon: plasmid pTX376-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U64_RS27570 () | 2589..3464 | + | 876 | WP_001302175.1 | hypothetical protein | VF |
| E4U64_RS27575 () | 3465..5432 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E4U64_RS27580 () | 5432..6937 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E4U64_RS27585 () | 6939..8162 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E4U64_RS27590 () | 8193..8627 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E4U64_RS27595 () | 8624..9178 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E4U64_RS27600 () | 9193..9540 | + | 348 | WP_000173396.1 | hypothetical protein | VF |
| E4U64_RS27605 () | 9537..10136 | + | 600 | WP_000082782.1 | hypothetical protein | VF |
| E4U64_RS27610 () | 10133..11110 | + | 978 | WP_000776550.1 | hypothetical protein | VF |
| E4U64_RS27615 () | 11149..12321 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E4U64_RS27620 () | 12308..12820 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E4U64_RS27625 () | 12878..13711 | + | 834 | WP_000096786.1 | hypothetical protein | VF |
| E4U64_RS27630 () | 13803..14204 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E4U64_RS27635 () | 14383..15554 | + | 1172 | Protein_14 | IS3 family transposase ISLad1 | Transposase |
| E4U64_RS27640 () | 16095..16610 | + | 516 | WP_000839950.1 | hypothetical protein | VF |
| E4U64_RS27645 () | 16612..19608 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E4U64_RS27650 () | 19658..21778 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E4U64_RS27655 () | 21782..23221 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E4U64_RS27660 () | 23342..23834 | + | 493 | Protein_19 | Transcriptional repressor MprA | VF |
| E4U64_RS27665 () | 23965..24195 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| E4U64_RS27670 () | 24316..25056 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| E4U64_RS27675 () | 25341..26318 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E4U64_RS27680 () | 26726..26926 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| E4U64_RS27685 () | 26923..27543 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| E4U64_RS27690 () | 27540..28223 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| E4U64_RS27695 () | 28682..28900 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E4U64_RS27700 () | 28902..29207 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E4U64_RS27705 () | 29208..30014 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| E4U64_RS27715 () | 32026..32781 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| E4U64_RS27720 () | 33369..34535 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| E4U64_RS27725 () | 34535..35506 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E4U64_RS27730 () | 36115..37017 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| E4U64_RS27735 () | 37021..37326 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| E4U64_RS27740 () | 37403..38086 | + | 684 | WP_000085945.1 | DNA methylase | - |
| E4U64_RS27745 () | 38087..38308 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| E4U64_RS27750 () | 38202..38756 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E4U64_RS27755 () | 38802..39135 | + | 334 | Protein_38 | hypothetical protein | - |
| E4U64_RS27760 () | 39451..40023 | + | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E4U64_RS27765 () | 40119..40421 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| E4U64_RS27770 () | 40468..40890 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E4U64_RS27775 () | 40887..41078 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| E4U64_RS27780 () | 41197..41586 | + | 390 | WP_001303399.1 | hypothetical protein | - |
| E4U64_RS27785 () | 42074..42304 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| E4U64_RS27790 () | 42356..43717 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| E4U64_RS27795 () | 43764..44327 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E4U64_RS27800 () | 44413..44856 | - | 444 | WP_001492078.1 | hypothetical protein | - |
| E4U64_RS27805 () | 44926..45132 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| E4U64_RS27810 () | 45158..45610 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E4U64_RS27815 () | 45667..45900 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| E4U64_RS27820 () | 45966..47924 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E4U64_RS27825 () | 47979..48413 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E4U64_RS27830 () | 48410..49171 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 49140..49338 | + | 199 | NuclAT_0 | - | - |
| - () | 49140..49338 | + | 199 | NuclAT_0 | - | - |
| - () | 49140..49338 | + | 199 | NuclAT_0 | - | - |
| - () | 49140..49338 | + | 199 | NuclAT_0 | - | - |
| E4U64_RS27835 () | 49403..49561 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| E4U64_RS27840 () | 49695..51716 | + | 2022 | Protein_55 | hypothetical protein | Relaxase |
| E4U64_RS27845 () | 51784..52215 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| E4U64_RS27850 () | 52852..53201 | - | 350 | Protein_57 | IS3 family transposase IS3H | Transposase |
| E4U64_RS27855 () | 53295..53558 | + | 264 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| E4U64_RS27860 () | 53598..53754 | + | 157 | Protein_59 | IS21 family transposase ISEc62 | Transposase |
| E4U64_RS27865 () | 53715..53867 | + | 153 | Protein_60 | IS1 family transposase | - |
| E4U64_RS27870 () | 53974..63483 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| E4U64_RS27875 () | 63557..63781 | + | 225 | Protein_62 | IS3 family transposase IS3H | Transposase |
| E4U64_RS27880 () | 63774..64019 | - | 246 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| E4U64_RS27885 () | 64026..64277 | - | 252 | Protein_64 | IS3 family transposase IS1203 | Transposase |
| E4U64_RS27890 () | 64478..64858 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS27895 () | 64855..65202 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS27900 () | 65252..66790 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS27905 () | 66829..68172 | + | 1344 | Protein_68 | Multifunctional conjugation protein TraI | Relaxase |
| E4U64_RS27910 () | 68192..68938 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| E4U64_RS27915 () | 68997..69857 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| E4U64_RS27920 () | 69960..70520 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| E4U64_RS27925 () | 70653..70865 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| E4U64_RS27930 () | 71110..71571 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| E4U64_RS27935 () | 71617..71826 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| E4U64_RS27940 () | 71864..72202 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| E4U64_RS27945 () | 72442..72696 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| E4U64_RS27950 () | 72932..73006 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| E4U64_RS27955 () | 72999..73856 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| E4U64_RS27960 () | 74768..75052 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E4U64_RS27965 () | 75052..75327 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4U64_RS27970 () | 75422..75628 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| E4U64_RS27975 () | 75728..75943 | - | 216 | Protein_82 | transposase | - |
| E4U64_RS27980 () | 75987..76553 | - | 567 | Protein_83 | IS3 family transposase ISSd1 | Transposase |
| E4U64_RS27985 () | 76553..76969 | - | 417 | Protein_84 | transposase zinc-binding domain-containing protein | - |
| E4U64_RS27990 () | 77128..78341 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4U64_RS27995 () | 78644..80854 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| E4U64_RS28000 () | 80898..81287 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| E4U64_RS28005 () | 81344..82332 | + | 989 | Protein_88 | IS3 family transposase IS629 | Transposase |
| E4U64_RS28010 () | 82513..86415 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| E4U64_RS28015 () | 86631..88169 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS28020 () | 88219..88566 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS28025 () | 88563..88943 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E4U64_RS28030 () | 89121..89602 | - | 482 | Protein_93 | IS1 family transposase IS1N | Transposase |
| E4U64_RS28035 () | 91043..91864 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E4U64_RS28040 () | 91864..92970 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E4U64_RS28045 () | 93060..94781 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E4U64_RS28050 () | 94855..95853 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E4U64_RS28055 () | 95906..96094 | + | 189 | Protein_98 | hypothetical protein | - |
| E4U64_RS28060 () | 96198..96284 | - | 87 | Protein_99 | IS3 family transposase ISEhe3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|