MGE detailed information
MGE type: Prophage MGE length: 46352 bp
Accession: NZ_CP038282 Location: 4398094..4444445 Organism: Escherichia coli O157:H7 strain F8492 Replicon: chromosome
Accession: NZ_CP038282 Location: 4398094..4444445 Organism: Escherichia coli O157:H7 strain F8492 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4T53_RS22165 () | 4394386..4395342 | + | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
| E4T53_RS22170 () | 4395521..4396648 | - | 1128 | WP_000171065.1 | MFS transporter | - |
| E4T53_RS22175 () | 4396790..4397848 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| E4T53_RS22180 () | 4398094..4398996 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator PgrR | VF |
| E4T53_RS22185 () | 4399699..4399977 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| E4T53_RS22190 () | 4400144..4400866 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
| E4T53_RS22195 () | 4400965..4401864 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
| E4T53_RS22200 () | 4402540..4403496 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| E4T53_RS22205 () | 4403629..4405962 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| E4T53_RS22210 () | 4405976..4406299 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| E4T53_RS22215 () | 4406299..4406520 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| E4T53_RS22220 () | 4406517..4407074 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| E4T53_RS22225 () | 4407071..4407331 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| E4T53_RS22230 () | 4408265..4409017 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| E4T53_RS22235 () | 4409014..4409565 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| E4T53_RS22240 () | 4409571..4409843 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| E4T53_RS22245 () | 4410253..4410819 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| E4T53_RS22250 () | 4410819..4411409 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| E4T53_RS22255 () | 4411440..4412072 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| E4T53_RS22260 () | 4412065..4412523 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| E4T53_RS22265 () | 4412523..4413140 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| E4T53_RS22270 () | 4413113..4413508 | - | 396 | WP_053905173.1 | hypothetical protein | - |
| E4T53_RS22275 () | 4413578..4414791 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4T53_RS22280 () | 4414835..4415257 | - | 423 | Protein_4367 | integrase arm-type DNA-binding domain-containing protein | - |
| E4T53_RS22285 () | 4415744..4416178 | + | 435 | Protein_4368 | IS3 family transposase ISEc48 | Transposase |
| E4T53_RS22290 () | 4416220..4416963 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| E4T53_RS22295 () | 4417787..4418560 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| E4T53_RS22300 () | 4418618..4419172 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E4T53_RS22305 () | 4419202..4419612 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| E4T53_RS22310 () | 4419633..4420055 | + | 423 | Protein_4373 | tail fiber assembly protein | - |
| E4T53_RS22315 () | 4420052..4421157 | + | 1106 | Protein_4374 | IS3 family transposase IS1203 | Transposase |
| E4T53_RS22320 () | 4421197..4421787 | - | 591 | WP_136760493.1 | tail fiber assembly protein | - |
| E4T53_RS22325 () | 4421787..4422581 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| E4T53_RS22330 () | 4422581..4422892 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| E4T53_RS22335 () | 4422889..4423811 | - | 923 | Protein_4378 | replication protein | - |
| E4T53_RS22340 () | 4423844..4424137 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| E4T53_RS22345 () | 4424256..4424456 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| E4T53_RS22350 () | 4424557..4425270 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| E4T53_RS22355 () | 4425398..4426254 | + | 857 | Protein_4382 | NYN domain-containing protein | - |
| E4T53_RS22360 () | 4426376..4427589 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4T53_RS22365 () | 4427916..4428161 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| E4T53_RS22370 () | 4428106..4429026 | + | 921 | Protein_4385 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E4T53_RS22380 () | 4429231..4430484 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E4T53_RS22385 () | 4430496..4431599 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E4T53_RS22390 () | 4431887..4432942 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E4T53_RS22395 () | 4432981..4433382 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E4T53_RS22400 () | 4433440..4434684 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4434100..4434180 | - | 81 | NuclAT_11 | - | - |
| - () | 4434100..4434180 | - | 81 | NuclAT_11 | - | - |
| - () | 4434100..4434180 | - | 81 | NuclAT_11 | - | - |
| - () | 4434100..4434180 | - | 81 | NuclAT_11 | - | - |
| E4T53_RS22405 () | 4434776..4435234 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E4T53_RS22410 () | 4435495..4436952 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E4T53_RS22415 () | 4437009..4437566 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E4T53_RS22420 () | 4437478..4437744 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E4T53_RS22425 () | 4438051..4438503 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E4T53_RS22430 () | 4438513..4438911 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E4T53_RS22435 () | 4438914..4439207 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E4T53_RS22440 () | 4439259..4440314 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| E4T53_RS22445 () | 4440385..4441170 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| E4T53_RS22450 () | 4441115..4442854 | + | 1740 | WP_001301901.1 | Flagellar biosynthesis protein FlhA | VF |
| E4T53_RS22455 () | 4442999..4443496 | - | 498 | Protein_4401 | REP-associated tyrosine transposase RayT | - |
| E4T53_RS22460 () | 4443672..4444445 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| E4T53_RS22465 () | 4444631..4444891 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E4T53_RS22470 () | 4444910..4445170 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| E4T53_RS22475 () | 4445326..4446066 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E4T53_RS22480 () | 4446037..4446804 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| E4T53_RS22485 () | 4446909..4447487 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|