MGE detailed information
MGE type: Genomic_island MGE length: 33327 bp
Accession: NZ_CP038203 Location: 1382656..1415982 Organism: Paracoccus pantotrophus strain DSM 11072 Replicon: chromosome
Accession: NZ_CP038203 Location: 1382656..1415982 Organism: Paracoccus pantotrophus strain DSM 11072 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3U24_RS06850 | 1377785..1377949 | - | 165 | WP_181817364.1 | hypothetical protein | - |
| E3U24_RS06855 (E3U24_06795) | 1377975..1379312 | + | 1338 | WP_258553475.1 | DUF3363 domain-containing protein | - |
| E3U24_RS06860 (E3U24_06800) | 1379345..1381354 | + | 2010 | WP_114669533.1 | conjugal transfer protein TraG | - |
| E3U24_RS06865 (E3U24_06805) | 1381368..1381802 | + | 435 | WP_114669534.1 | CopG family transcriptional regulator | - |
| E3U24_RS06870 (E3U24_06810) | 1381844..1382269 | - | 426 | WP_114669535.1 | type II toxin-antitoxin system VapC family toxin | - |
| E3U24_RS06875 (E3U24_06815) | 1382266..1382529 | - | 264 | WP_114669536.1 | plasmid stabilization protein | - |
| E3U24_RS06885 (E3U24_06825) | 1383631..1384128 | - | 498 | WP_024846101.1 | Rrf2 family transcriptional regulator | - |
| E3U24_RS06890 (E3U24_06830) | 1384273..1385922 | + | 1650 | WP_024846100.1 | ATP-binding/permease protein CydD | VF |
| E3U24_RS06895 (E3U24_06835) | 1385919..1387556 | + | 1638 | WP_028710959.1 | Microcin-J25 export ATP-binding/permease protein McjD | VF |
| E3U24_RS06900 (E3U24_06840) | 1387681..1389291 | + | 1611 | WP_024846099.1 | cytochrome ubiquinol oxidase subunit I | - |
| E3U24_RS06905 (E3U24_06845) | 1389297..1390460 | + | 1164 | WP_024846098.1 | cytochrome d ubiquinol oxidase subunit II | - |
| E3U24_RS06910 (E3U24_06850) | 1390475..1390612 | + | 138 | WP_074991410.1 | cytochrome bd-I oxidase subunit CydX | - |
| E3U24_RS06915 (E3U24_06855) | 1390735..1391172 | + | 438 | WP_024846097.1 | hypothetical protein | - |
| E3U24_RS06920 (E3U24_06860) | 1391247..1392179 | + | 933 | WP_028713484.1 | IS5 family transposase ISPpa8 | Transposase |
| E3U24_RS06925 (E3U24_06865) | 1392281..1392439 | - | 159 | WP_220154693.1 | zinc ribbon domain-containing protein | - |
| E3U24_RS06930 (E3U24_06870) | 1392484..1392705 | - | 222 | WP_024846230.1 | hypothetical protein | - |
| E3U24_RS06935 (E3U24_06875) | 1393445..1394275 | + | 831 | WP_197029496.1 | transporter substrate-binding domain-containing protein | - |
| E3U24_RS06940 (E3U24_06880) | 1394373..1395038 | + | 666 | WP_028710975.1 | ectoine/hydroxyectoine ABC transporter permease subunit EhuC | - |
| E3U24_RS06945 (E3U24_06885) | 1395042..1395713 | + | 672 | WP_028710976.1 | ectoine/hydroxyectoine ABC transporter permease subunit EhuD | - |
| E3U24_RS06950 (E3U24_06890) | 1395710..1396528 | + | 819 | WP_028710977.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| E3U24_RS06955 | 1396764..1397174 | - | 411 | Protein_1361 | heavy metal translocating P-type ATPase | - |
| E3U24_RS06960 (E3U24_06900) | 1397456..1397971 | + | 516 | Protein_1362 | IS21 family transposase ISPkr1 | Transposase |
| E3U24_RS06965 (E3U24_06905) | 1398019..1399208 | + | 1190 | WP_114669626.1 | IS3 family transposase ISOba1 | Transposase |
| E3U24_RS06970 (E3U24_06910) | 1399223..1400299 | + | 1077 | Protein_1364 | IS21 family transposase ISPkr1 | Transposase |
| E3U24_RS06975 (E3U24_06915) | 1400229..1400957 | + | 729 | WP_024843951.1 | IS21 family transposase ISPkr1 | Transposase |
| E3U24_RS06980 (E3U24_06920) | 1401165..1402721 | - | 1557 | WP_281029332.1 | IS66 family transposase ISRel8 | Transposase |
| E3U24_RS06985 (E3U24_06925) | 1402776..1403129 | - | 354 | WP_114669553.1 | IS66 family transposase ISRel8 | Transposase |
| E3U24_RS06990 (E3U24_06930) | 1403126..1403554 | - | 429 | WP_028710474.1 | IS66 family transposase ISUnCu14 | Transposase |
| E3U24_RS06995 (E3U24_06935) | 1403639..1403935 | + | 297 | Protein_1369 | transposase | - |
| E3U24_RS07000 (E3U24_06940) | 1404012..1404566 | - | 555 | WP_114669602.1 | helix-turn-helix transcriptional regulator | - |
| E3U24_RS07005 (E3U24_06945) | 1404685..1404927 | + | 243 | WP_240540236.1 | hypothetical protein | - |
| E3U24_RS07010 (E3U24_06950) | 1405127..1406227 | + | 1101 | WP_114669600.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E3U24_RS07015 (E3U24_06955) | 1406256..1407013 | + | 758 | WP_089852160.1 | IS5 family transposase ISPpa2 | Transposase |
| E3U24_RS07020 (E3U24_06960) | 1407081..1408442 | + | 1362 | WP_028710598.1 | plasmid recombination protein | - |
| E3U24_RS07025 (E3U24_06965) | 1408547..1408792 | + | 246 | WP_024845133.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| E3U24_RS07030 (E3U24_06970) | 1408789..1409076 | + | 288 | WP_024845134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3U24_RS07035 (E3U24_06975) | 1409095..1409667 | + | 573 | WP_147278009.1 | hypothetical protein | - |
| E3U24_RS07040 (E3U24_06980) | 1409891..1411063 | - | 1173 | WP_036747930.1 | ATP-binding protein | - |
| E3U24_RS07045 (E3U24_06985) | 1411207..1411545 | - | 339 | WP_028710997.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| E3U24_RS07050 (E3U24_06990) | 1411588..1412109 | + | 522 | WP_051419865.1 | DUF6428 family protein | - |
| E3U24_RS07055 (E3U24_06995) | 1412115..1412651 | + | 537 | WP_181817367.1 | arsenate reductase ArsC | - |
| E3U24_RS07060 (E3U24_07000) | 1412662..1413093 | + | 432 | WP_028710994.1 | arsenate reductase (glutaredoxin) | - |
| E3U24_RS07065 (E3U24_07005) | 1413109..1413837 | + | 729 | Protein_1383 | ACR3 family arsenite efflux transporter | - |
| E3U24_RS07070 (E3U24_07010) | 1413893..1414825 | - | 933 | WP_028713484.1 | IS5 family transposase ISPpa8 | Transposase |
| E3U24_RS07075 (E3U24_07015) | 1414888..1415061 | + | 174 | Protein_1385 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E3U24_RS07085 (E3U24_07025) | 1416088..1416558 | - | 471 | WP_258553497.1 | TonB-dependent receptor | - |
| E3U24_RS07090 (E3U24_07030) | 1416678..1418423 | - | 1746 | Protein_1388 | TonB-dependent siderophore receptor | - |
| E3U24_RS07095 (E3U24_07035) | 1418670..1419656 | - | 987 | WP_011749250.1 | FecR domain-containing protein | - |
| E3U24_RS07100 (E3U24_07040) | 1419725..1420237 | - | 513 | WP_011749251.1 | RNA polymerase sigma factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|