MGE detailed information
MGE type: Prophage MGE length: 71636 bp
Accession: NZ_CP038021 Location: 2066622..2138257 Organism: Staphylococcus aureus strain 04-002 Replicon: chromosome
Accession: NZ_CP038021 Location: 2066622..2138257 Organism: Staphylococcus aureus strain 04-002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3I93_RS10490 () | 2062160..2062840 | - | 681 | WP_000645732.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| E3I93_RS10495 () | 2062841..2063737 | - | 897 | WP_000991315.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| E3I93_RS10500 () | 2063734..2064114 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| E3I93_RS10505 () | 2064372..2064548 | - | 177 | WP_000681966.1 | hypothetical protein | - |
| E3I93_RS10510 () | 2064790..2064888 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| E3I93_RS10515 () | 2065088..2066374 | + | 1287 | WP_001068528.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E3I93_RS10520 () | 2066622..2068267 | - | 1646 | Protein_1951 | IS1182-like element ISSau3 family transposase | - |
| E3I93_RS10525 () | 2068565..2070634 | - | 2070 | WP_000669728.1 | Protein map | VF |
| E3I93_RS10535 () | 2071591..2071770 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| E3I93_RS10545 () | 2072081..2072341 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| E3I93_RS10550 () | 2072394..2072744 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| E3I93_RS10555 () | 2073428..2073877 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| E3I93_RS10560 () | 2073972..2074310 | - | 339 | Protein_1957 | SH3 domain-containing protein | - |
| E3I93_RS10575 () | 2074912..2075403 | - | 492 | WP_000920041.1 | Staphylokinase | VF |
| E3I93_RS10580 () | 2075594..2076349 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| E3I93_RS10585 () | 2076361..2076615 | - | 255 | WP_000611512.1 | phage holin | - |
| E3I93_RS10590 () | 2076667..2076774 | + | 108 | WP_031790389.1 | hypothetical protein | - |
| - () | 2076696..2076835 | + | 140 | NuclAT_0 | - | - |
| - () | 2076696..2076835 | + | 140 | NuclAT_0 | - | - |
| - () | 2076696..2076835 | + | 140 | NuclAT_0 | - | - |
| - () | 2076696..2076835 | + | 140 | NuclAT_0 | - | - |
| - () | 2076704..2076761 | + | 58 | - | - | Antitoxin Detail |
| E3I93_RS10595 () | 2076827..2077003 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| E3I93_RS10600 () | 2077153..2077449 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| E3I93_RS10605 () | 2077507..2077794 | - | 288 | WP_001040254.1 | hypothetical protein | - |
| E3I93_RS10610 () | 2077841..2077993 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| E3I93_RS10615 () | 2077983..2081768 | - | 3786 | WP_134521565.1 | hypothetical protein | - |
| E3I93_RS10620 () | 2081784..2083268 | - | 1485 | WP_023487204.1 | phage tail family protein | - |
| E3I93_RS10625 () | 2083265..2087794 | - | 4530 | WP_134521567.1 | phage tail tape measure protein | - |
| E3I93_RS14835 () | 2087851..2087988 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| E3I93_RS10630 () | 2088039..2088389 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| E3I93_RS10635 () | 2088440..2088664 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| E3I93_RS10640 () | 2088706..2089350 | - | 645 | WP_000268741.1 | phage tail protein | - |
| E3I93_RS10645 () | 2089351..2089758 | - | 408 | WP_134521569.1 | hypothetical protein | - |
| E3I93_RS10650 () | 2089755..2090159 | - | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| E3I93_RS10655 () | 2090156..2090518 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| E3I93_RS10660 () | 2090502..2090786 | - | 285 | WP_000150937.1 | phage head-tail adapter protein | - |
| E3I93_RS10665 () | 2090776..2091060 | - | 285 | WP_000238240.1 | hypothetical protein | - |
| E3I93_RS10670 () | 2091080..2092225 | - | 1146 | WP_000154569.1 | phage major capsid protein | - |
| E3I93_RS10675 () | 2092248..2092985 | - | 738 | WP_134521571.1 | Clp protease ClpP | - |
| E3I93_RS10680 () | 2092969..2094156 | - | 1188 | WP_000025266.1 | phage portal protein | - |
| E3I93_RS10685 () | 2094172..2095833 | - | 1662 | WP_000625096.1 | terminase large subunit | - |
| E3I93_RS10690 () | 2095830..2096174 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| E3I93_RS10695 () | 2096305..2096604 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| E3I93_RS10700 () | 2096836..2097252 | - | 417 | WP_070958032.1 | transcriptional regulator | - |
| E3I93_RS10705 () | 2097280..2097480 | - | 201 | WP_000265041.1 | DUF1514 family protein | - |
| E3I93_RS10710 () | 2097480..2097629 | - | 150 | WP_000595238.1 | transcriptional activator RinB | - |
| E3I93_RS10715 () | 2097622..2097858 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| E3I93_RS10720 () | 2097883..2098119 | - | 237 | WP_000195781.1 | DUF1381 domain-containing protein | - |
| E3I93_RS10725 () | 2098136..2098309 | - | 174 | WP_134521573.1 | hypothetical protein | - |
| E3I93_RS10730 () | 2098346..2098882 | - | 537 | WP_134521575.1 | dUTPase | - |
| E3I93_RS10735 () | 2098875..2099045 | - | 171 | WP_134521578.1 | hypothetical protein | - |
| E3I93_RS10740 () | 2099042..2099287 | - | 246 | WP_001065116.1 | DUF1024 family protein | - |
| E3I93_RS10745 () | 2099302..2099550 | - | 249 | WP_106900083.1 | phi PVL orf 51-like protein | - |
| E3I93_RS10750 () | 2099551..2099922 | - | 372 | WP_134521580.1 | hypothetical protein | - |
| E3I93_RS10755 () | 2099923..2100108 | - | 186 | WP_001187254.1 | DUF3113 family protein | - |
| E3I93_RS10760 () | 2100113..2100517 | - | 405 | WP_000049814.1 | DUF1064 domain-containing protein | - |
| E3I93_RS10765 () | 2100527..2100748 | - | 222 | WP_001123671.1 | DUF3269 family protein | - |
| E3I93_RS10770 () | 2100761..2100919 | - | 159 | WP_000256597.1 | hypothetical protein | - |
| E3I93_RS10775 () | 2100913..2101692 | - | 780 | WP_001560437.1 | ATP-binding protein | - |
| E3I93_RS10780 () | 2101702..2102505 | - | 804 | WP_134521582.1 | phage replisome organizer N-terminal domain-containing protein | - |
| E3I93_RS10785 () | 2102477..2103169 | - | 693 | WP_001644874.1 | hypothetical protein | - |
| E3I93_RS10790 () | 2103182..2103733 | - | 552 | WP_031770576.1 | hypothetical protein | - |
| E3I93_RS10795 () | 2103764..2104552 | - | 789 | WP_029625654.1 | ATP-binding protein | - |
| E3I93_RS10800 () | 2104545..2104766 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| E3I93_RS10805 () | 2104776..2105036 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| E3I93_RS10810 () | 2105061..2105342 | - | 282 | WP_033857064.1 | DUF2482 family protein | - |
| E3I93_RS10815 () | 2105436..2105597 | - | 162 | WP_000066021.1 | DUF1270 family protein | - |
| E3I93_RS10820 () | 2105594..2105914 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| E3I93_RS10825 () | 2105969..2106349 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| E3I93_RS10830 () | 2106336..2106533 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| E3I93_RS10835 () | 2106549..2107304 | - | 756 | WP_001148342.1 | phage antirepressor KilAC domain-containing protein | - |
| E3I93_RS10840 () | 2107361..2107899 | + | 539 | Protein_2012 | hypothetical protein | - |
| E3I93_RS10845 () | 2107923..2108183 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| E3I93_RS10850 () | 2108196..2108438 | - | 243 | WP_000639923.1 | DUF739 family protein | - |
| E3I93_RS10855 () | 2108602..2109318 | + | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| E3I93_RS10860 () | 2109330..2110184 | + | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| E3I93_RS14840 () | 2110258..2110404 | + | 147 | WP_000345949.1 | hypothetical protein | - |
| E3I93_RS10865 () | 2110401..2110586 | + | 186 | WP_000100503.1 | hypothetical protein | - |
| E3I93_RS10870 () | 2110786..2110968 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| E3I93_RS10875 () | 2111046..2111759 | + | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| E3I93_RS10880 () | 2111950..2112987 | + | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E3I93_RS10885 () | 2113038..2113870 | + | 833 | Protein_2022 | Phospholipase C | VF |
| E3I93_RS10890 () | 2114127..2115146 | - | 1020 | WP_000595617.1 | putative leukocidin-like protein 1 | VF |
| E3I93_RS10895 () | 2115168..2116223 | - | 1056 | WP_000791402.1 | putative leukocidin-like protein 2 | VF |
| E3I93_RS10900 () | 2116655..2117878 | + | 1224 | WP_000206618.1 | ArgE/DapE family deacylase | - |
| E3I93_RS10905 () | 2118317..2119624 | + | 1308 | WP_001045073.1 | TrkH family potassium uptake protein | - |
| E3I93_RS10915 () | 2120202..2120543 | - | 342 | WP_001573771.1 | hypothetical protein | - |
| E3I93_RS10920 () | 2120533..2120829 | - | 297 | WP_001573769.1 | hypothetical protein | - |
| E3I93_RS10925 () | 2120826..2121005 | - | 180 | WP_000201397.1 | hypothetical protein | - |
| E3I93_RS10930 () | 2122124..2123059 | + | 936 | WP_001239269.1 | TDT family transporter | - |
| E3I93_RS10940 () | 2123914..2124141 | - | 228 | WP_000812237.1 | hypothetical protein | - |
| E3I93_RS10945 () | 2124560..2125264 | + | 705 | WP_001035597.1 | Toxic shock syndrome toxin-1 | VF |
| E3I93_RS10950 () | 2125419..2125988 | - | 570 | WP_001293073.1 | terminase small subunit | - |
| E3I93_RS10955 () | 2125985..2126326 | - | 342 | WP_000358778.1 | hypothetical protein | - |
| E3I93_RS10960 () | 2126329..2126856 | - | 528 | WP_000771368.1 | spore coat protein | - |
| E3I93_RS10965 () | 2126907..2127125 | - | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| E3I93_RS10970 () | 2127143..2127721 | - | 579 | WP_000846285.1 | hypothetical protein | - |
| E3I93_RS10975 () | 2127733..2128074 | - | 342 | WP_001190608.1 | hypothetical protein | - |
| E3I93_RS10980 () | 2128610..2129251 | - | 642 | WP_001019766.1 | hypothetical protein | - |
| E3I93_RS10985 () | 2129248..2129628 | - | 381 | WP_000356937.1 | hypothetical protein | - |
| E3I93_RS10990 () | 2129940..2131649 | - | 1710 | WP_000447451.1 | DUF927 domain-containing protein | - |
| E3I93_RS10995 () | 2131663..2132532 | - | 870 | WP_001002721.1 | primase alpha helix C-terminal domain-containing protein | - |
| E3I93_RS11000 () | 2132596..2132913 | - | 318 | WP_001103930.1 | DUF1474 family protein | - |
| E3I93_RS11005 () | 2132914..2133297 | - | 384 | WP_000403839.1 | hypothetical protein | - |
| E3I93_RS11010 () | 2133299..2133502 | - | 204 | WP_001231378.1 | hypothetical protein | - |
| E3I93_RS11015 () | 2133487..2133642 | - | 156 | WP_000708433.1 | hypothetical protein | - |
| E3I93_RS11020 () | 2133639..2133956 | - | 318 | WP_000481967.1 | helix-turn-helix domain-containing protein | - |
| E3I93_RS11025 () | 2133961..2134179 | - | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
| E3I93_RS11030 () | 2134352..2135026 | + | 675 | WP_000620857.1 | helix-turn-helix transcriptional regulator | - |
| E3I93_RS11035 () | 2135040..2136212 | + | 1173 | WP_000179345.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| E3I93_RS11040 () | 2136281..2137897 | - | 1617 | WP_000240651.1 | 60 kDa chaperonin | VF |
| E3I93_RS11045 () | 2137973..2138257 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| E3I93_RS11050 () | 2138432..2139175 | + | 744 | WP_000197638.1 | CPBP family intramembrane metalloprotease | - |
| E3I93_RS11055 () | 2139200..2140417 | - | 1218 | WP_134521584.1 | hypothetical protein | - |
| E3I93_RS11060 () | 2140614..2141240 | + | 627 | WP_000522388.1 | nitroreductase family protein | - |
| E3I93_RS11065 () | 2141601..2142386 | + | 786 | WP_000867948.1 | carbon-nitrogen family hydrolase | - |
| E3I93_RS11070 () | 2142989..2143123 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|