MGE detailed information
MGE type: Prophage MGE length: 33501 bp
Accession: NZ_CP037996 Location: 3405520..3439020 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Accession: NZ_CP037996 Location: 3405520..3439020 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBL25_RS17515 () | 3400944..3402638 | - | 1695 | Protein_3360 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| CBL25_RS17520 () | 3402809..3402991 | - | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| CBL25_RS17525 () | 3403070..3403987 | - | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| CBL25_RS17530 () | 3404160..3405080 | + | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| CBL25_RS17535 () | 3405069..3405539 | - | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| CBL25_RS17540 () | 3405520..3406938 | - | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| CBL25_RS17545 () | 3407005..3407506 | - | 502 | Protein_3366 | HD domain-containing protein | - |
| CBL25_RS17550 () | 3407585..3407841 | - | 257 | Protein_3367 | cell division protein DrpB | - |
| CBL25_RS17560 () | 3409106..3409816 | + | 711 | Protein_3369 | porin | - |
| CBL25_RS17570 () | 3411159..3411329 | + | 171 | Protein_3371 | porin | - |
| CBL25_RS17580 () | 3411955..3412652 | + | 698 | WP_232111816.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS17585 () | 3412698..3413549 | + | 852 | WP_000218218.1 | protein deglycase HchA | - |
| CBL25_RS17590 () | 3413657..3415015 | - | 1359 | WP_000826714.1 | two-component system sensor histidine kinase HprS | - |
| CBL25_RS17595 () | 3415015..3415686 | - | 672 | WP_001347103.1 | Sensor histidine kinase RcsC | VF |
| CBL25_RS17600 () | 3415819..3416232 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| CBL25_RS17605 () | 3416340..3417344 | + | 1005 | Protein_3377 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| CBL25_RS17610 () | 3417345..3417980 | + | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| CBL25_RS17615 () | 3418237..3418887 | + | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| CBL25_RS17625 () | 3419965..3420234 | - | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| CBL25_RS17630 () | 3420291..3420959 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| CBL25_RS17635 () | 3421271..3422914 | + | 1644 | WP_014532281.1 | hypothetical protein | VF |
| CBL25_RS17640 () | 3423091..3423570 | - | 480 | Protein_3383 | DUF4376 domain-containing protein | - |
| CBL25_RS17645 () | 3423611..3424467 | - | 857 | Protein_3384 | IS3 family transposase ISSd1 | Transposase |
| CBL25_RS17650 () | 3424525..3425222 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS17660 () | 3425631..3425846 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| CBL25_RS17665 () | 3425945..3426618 | + | 674 | Protein_3387 | IS66 family transposase ISSfl3 | Transposase |
| CBL25_RS17670 () | 3426615..3426965 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| CBL25_RS24610 () | 3426962..3427255 | + | 294 | WP_252997104.1 | IS66 family transposase ISSfl3 | Transposase |
| CBL25_RS24615 () | 3427404..3427484 | + | 81 | WP_252997118.1 | hypothetical protein | - |
| CBL25_RS17680 () | 3427513..3428210 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS17705 () | 3428654..3429343 | - | 690 | WP_134799254.1 | bacteriophage antitermination protein Q | - |
| CBL25_RS17710 () | 3429340..3429705 | - | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CBL25_RS17715 () | 3429706..3430764 | - | 1059 | WP_134799255.1 | DUF968 domain-containing protein | - |
| CBL25_RS17720 () | 3430766..3431044 | - | 279 | WP_011069426.1 | hypothetical protein | - |
| CBL25_RS17730 () | 3431212..3431367 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 3431379..3431437 | + | 59 | - | - | Antitoxin Detail |
| CBL25_RS17745 () | 3432018..3432434 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| CBL25_RS17750 () | 3432461..3432601 | + | 141 | Protein_3398 | DUF4224 domain-containing protein | - |
| CBL25_RS17755 () | 3432601..3433648 | + | 1048 | Protein_3399 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CBL25_RS17765 () | 3433859..3434656 | + | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| CBL25_RS17775 () | 3434994..3436256 | + | 1263 | Protein_3401 | hypothetical protein ; Integrase | Integrase |
| CBL25_RS17780 () | 3436363..3437529 | - | 1167 | Protein_3402 | IS3 family transposase | - |
| CBL25_RS17785 () | 3437615..3438813 | + | 1199 | Protein_3403 | IS3 family transposase | - |
| CBL25_RS17790 () | 3438814..3439020 | + | 207 | WP_000466572.1 | hypothetical protein | - |
| CBL25_RS17795 () | 3439122..3440576 | + | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| CBL25_RS17800 () | 3440919..3441635 | + | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CBL25_RS17810 () | 3442261..3443904 | - | 1644 | Protein_3407 | toxic metabolite efflux MATE transporter YeeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|