MGE detailed information
MGE type: Prophage MGE length: 64333 bp
Accession: NZ_CP037996 Location: 2752341..2816673 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Accession: NZ_CP037996 Location: 2752341..2816673 Organism: Shigella flexneri strain FC906 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBL25_RS13840 () | 2748245..2748883 | - | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| CBL25_RS13845 () | 2748901..2749482 | - | 582 | Protein_2654 | alpha/beta hydrolase | - |
| CBL25_RS13850 () | 2749711..2750907 | + | 1197 | WP_134799231.1 | IS110-like element ISEc20 family transposase | - |
| CBL25_RS13855 () | 2750924..2751283 | - | 360 | Protein_2656 | alpha/beta hydrolase | - |
| CBL25_RS13860 () | 2751283..2752203 | - | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| CBL25_RS13865 () | 2752341..2752775 | + | 435 | Protein_2658 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE | VF |
| CBL25_RS13870 () | 2752820..2753972 | - | 1153 | Protein_2659 | IS3 family transposase | - |
| CBL25_RS13875 () | 2754076..2754486 | + | 411 | Protein_2660 | YdaU family protein | - |
| CBL25_RS13880 () | 2754500..2755723 | - | 1224 | Protein_2661 | IS3 family transposase | - |
| CBL25_RS24475 () | 2756247..2756416 | + | 170 | Protein_2662 | hypothetical protein | - |
| CBL25_RS13890 () | 2756562..2757305 | + | 744 | WP_000788999.1 | ATP-binding protein | - |
| CBL25_RS13895 () | 2757320..2757742 | + | 423 | WP_001118168.1 | DUF977 family protein | - |
| CBL25_RS13900 () | 2757799..2758155 | + | 357 | WP_005048249.1 | hypothetical protein | - |
| CBL25_RS13905 () | 2758217..2758465 | + | 249 | WP_134799303.1 | DUF4014 family protein | - |
| CBL25_RS13910 () | 2758467..2758832 | + | 366 | WP_001229297.1 | HNH endonuclease signature motif containing protein | - |
| CBL25_RS13915 () | 2758829..2759494 | + | 666 | WP_000208062.1 | hypothetical protein | - |
| CBL25_RS13920 () | 2759494..2759859 | + | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| - | 2760244..2760302 | - | 59 | - | - | Antitoxin Detail |
| CBL25_RS13925 () | 2760314..2760469 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| CBL25_RS13940 () | 2761806..2762405 | + | 600 | WP_000940329.1 | DUF1367 family protein | - |
| CBL25_RS13945 () | 2762405..2762695 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| CBL25_RS13950 () | 2762692..2763138 | + | 447 | Protein_2674 | DUF1133 family protein | - |
| CBL25_RS13955 () | 2763147..2764312 | - | 1166 | Protein_2675 | IS3 family transposase ISLad1 | Transposase |
| CBL25_RS13960 () | 2764385..2764495 | + | 111 | Protein_2676 | DUF1133 family protein | - |
| CBL25_RS13965 () | 2764648..2764821 | + | 174 | WP_000504450.1 | hypothetical protein | - |
| CBL25_RS13970 () | 2764883..2766022 | + | 1140 | Protein_2678 | IS3 family transposase ISSd1 | Transposase |
| CBL25_RS13975 () | 2766093..2766575 | + | 483 | WP_000068107.1 | ORF6N domain-containing protein | - |
| CBL25_RS14005 () | 2767209..2768813 | + | 1605 | WP_000615491.1 | Protein MgtC ; Integrase | Integrase |
| CBL25_RS14010 () | 2769634..2770800 | + | 1167 | Protein_2681 | IS3 family transposase | - |
| CBL25_RS14015 () | 2771189..2771341 | + | 153 | Protein_2682 | Rha family transcriptional regulator | - |
| CBL25_RS14020 () | 2771400..2772097 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS14025 () | 2772115..2772992 | + | 878 | Protein_2684 | IS3 family transposase ISSd1 | Transposase |
| CBL25_RS14030 () | 2773020..2773409 | + | 390 | WP_047205378.1 | hypothetical protein | - |
| CBL25_RS23960 () | 2773412..2773932 | + | 521 | Protein_2686 | tail fiber assembly protein | - |
| CBL25_RS14045 () | 2773978..2775241 | + | 1264 | Protein_2687 | prophage tail fiber N-terminal domain-containing protein | - |
| CBL25_RS14050 () | 2775192..2775815 | + | 624 | WP_000930141.1 | DUF4376 domain-containing protein | - |
| CBL25_RS14055 () | 2776016..2776873 | - | 858 | WP_000968134.1 | Aspartate ammonia-lyase | ARG |
| CBL25_RS14060 () | 2776870..2777727 | - | 858 | WP_001101728.1 | Anaerobic C4-dicarboxylate transporter DcuA | ARG |
| CBL25_RS14065 () | 2777724..2778551 | - | 828 | WP_000983722.1 | Thiol:disulfide interchange protein DsbD | VF |
| CBL25_RS14070 () | 2778551..2779465 | - | 915 | WP_000555620.1 | putative transcriptional regulatory protein NarL | VF |
| CBL25_RS14075 () | 2779897..2780538 | - | 642 | Protein_2693 | K(+)/H(+) antiporter NhaP2 ; Integrase | Integrase |
| CBL25_RS14080 () | 2780592..2781289 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS14085 () | 2781306..2781476 | - | 171 | Protein_2695 | DUF3596 domain-containing protein | - |
| CBL25_RS14090 () | 2781478..2781645 | - | 168 | WP_005049823.1 | excisionase family protein | - |
| CBL25_RS14095 () | 2781693..2782577 | - | 885 | WP_252997099.1 | IS3 family transposase IS629 | Transposase |
| CBL25_RS24480 () | 2782574..2782900 | - | 327 | WP_000165261.1 | IS3 family transposase IS629 | Transposase |
| CBL25_RS14100 () | 2782926..2784086 | - | 1161 | WP_005107813.1 | AAA family ATPase | - |
| CBL25_RS14105 () | 2784092..2784352 | - | 261 | WP_005135630.1 | host-nuclease inhibitor Gam family protein | - |
| CBL25_RS14110 () | 2784451..2784923 | + | 473 | Protein_2701 | transposase | - |
| CBL25_RS14115 () | 2784999..2786163 | + | 1165 | Protein_2702 | IS3 family transposase | - |
| CBL25_RS14120 () | 2786172..2786855 | + | 684 | Protein_2703 | IS3 family transposase IS600 | Transposase |
| CBL25_RS14125 () | 2786912..2788327 | - | 1416 | Protein_2704 | exodeoxyribonuclease VIII | - |
| CBL25_RS14130 () | 2788427..2788702 | - | 276 | WP_005049830.1 | hypothetical protein | - |
| CBL25_RS14135 () | 2788777..2788947 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| CBL25_RS14140 () | 2788947..2789168 | - | 222 | WP_000560210.1 | cell division protein FtsZ | - |
| CBL25_RS14145 () | 2790120..2790121 | - | 2 | WP_166739283.1 | IS3 family transposase ISEc27 | Transposase |
| CBL25_RS14150 () | 2790514..2791402 | - | 889 | Protein_2709 | Rha family transcriptional regulator | - |
| CBL25_RS14155 () | 2791903..2792112 | + | 210 | WP_128832265.1 | hypothetical protein | - |
| CBL25_RS23965 () | 2792622..2793002 | + | 381 | Protein_2711 | IS66 family transposase ISSfl3 | Transposase |
| CBL25_RS23970 () | 2793004..2793171 | + | 168 | Protein_2712 | IS66 family transposase ISSfl3 | Transposase |
| CBL25_RS14165 () | 2793122..2793745 | + | 624 | WP_000930142.1 | DUF4376 domain-containing protein | - |
| CBL25_RS24485 () | 2793751..2793855 | + | 105 | Protein_2714 | tail fiber assembly protein | - |
| CBL25_RS14175 () | 2793925..2795640 | - | 1716 | WP_128568580.1 | Transcriptional activator CadC | VF |
| CBL25_RS14185 () | 2796183..2796880 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| CBL25_RS14190 () | 2797160..2797606 | + | 447 | Protein_2717 | metallophosphoesterase | - |
| CBL25_RS14195 () | 2797671..2798825 | + | 1155 | Protein_2718 | IS3 family transposase | - |
| CBL25_RS14200 () | 2798869..2799057 | + | 189 | Protein_2719 | serine/threonine-protein phosphatase | - |
| CBL25_RS14205 () | 2799082..2799273 | - | 192 | WP_005049838.1 | YebW family protein | - |
| CBL25_RS14210 () | 2799378..2799614 | - | 237 | WP_001295499.1 | YebV family protein | - |
| CBL25_RS14215 () | 2799732..2801171 | - | 1440 | Protein_2722 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CBL25_RS14220 () | 2801252..2803885 | - | 2634 | Protein_2723 | Type-4 uracil-DNA glycosylase | VF |
| CBL25_RS14225 () | 2803854..2805137 | - | 1284 | WP_001207280.1 | membrane integrity lipid transport subunit YebS | - |
| CBL25_RS14230 () | 2805267..2805764 | + | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| CBL25_RS14235 () | 2805861..2806559 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| CBL25_RS14240 () | 2806579..2808627 | + | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
| CBL25_RS14245 () | 2808819..2809700 | + | 882 | WP_000984517.1 | protease HtpX | - |
| CBL25_RS14250 () | 2809746..2811119 | - | 1374 | WP_087613901.1 | MFS transporter | - |
| CBL25_RS14255 () | 2811296..2812087 | + | 792 | WP_001262181.1 | DNA-binding transcriptional regulator KdgR | - |
| CBL25_RS14260 () | 2812231..2812470 | - | 240 | WP_001211010.1 | YobH family protein | - |
| CBL25_RS14265 () | 2812630..2812773 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| CBL25_RS14270 () | 2812848..2813135 | + | 288 | WP_001006860.1 | YebO family protein | - |
| CBL25_RS14275 () | 2813804..2813947 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| CBL25_RS14280 () | 2813960..2814169 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CBL25_RS14285 () | 2814335..2815144 | + | 810 | WP_000010128.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CBL25_RS14290 () | 2815141..2815707 | - | 567 | WP_001668667.1 | manganese efflux pump MntP | - |
| CBL25_RS14300 () | 2816896..2817372 | - | 477 | WP_000156246.1 | DUF986 family protein | - |
| CBL25_RS14305 () | 2817427..2818278 | - | 852 | WP_134799233.1 | PTS mannose transporter subunit IID | - |
| CBL25_RS14310 () | 2818291..2819091 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| CBL25_RS14315 () | 2819154..2820125 | - | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|