MGE detailed information

MGE type: Conjugative plasmid        MGE length: 179816 bp
Accession: NZ_CP037966        Location: 1..179816         Organism: Klebsiella pneumoniae strain SCKP020135       Replicon: plasmid p1_020135


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLQ43_RS27120 () 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
CLQ43_RS27130 () 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CLQ43_RS27135 () 3655..4635 - 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
CLQ43_RS27140 () 4955..6391 + 1437 WP_080895248.1 putative cyclic di-GMP phosphodiesterase PdeB VF
CLQ43_RS27145 () 7374..8651 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
CLQ43_RS27150 () 8714..10711 - 1998 WP_004178088.1 choline BCCT transporter BetT -
CLQ43_RS27155 () 10863..11560 - 698 Protein_6 IS1 family transposase IS1X2 Transposase
CLQ43_RS27165 () 13049..13533 + 485 Protein_8 IS1 family transposase IS1X2 Transposase
CLQ43_RS27170 () 13549..14091 + 543 Protein_9 ISL3 family transposase ISKpn25 Transposase
CLQ43_RS27175 () 14387..14818 - 432 WP_004178091.1 silver-binding protein SilE -
CLQ43_RS27180 () 15069..16544 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CLQ43_RS27185 () 16537..17217 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CLQ43_RS27190 () 17407..18792 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
CLQ43_RS27195 () 18821..19174 + 354 WP_001246153.1 cation efflux system protein CusF -
CLQ43_RS27200 () 19288..20580 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CLQ43_RS27205 () 20591..23737 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CLQ43_RS27210 () 23824..24264 + 441 WP_000758228.1 hypothetical protein -
CLQ43_RS27215 () 24391..26838 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CLQ43_RS27220 () 26879..27076 + 198 WP_000843497.1 DUF2933 domain-containing protein -
CLQ43_RS27225 () 27110..27847 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
CLQ43_RS27230 () 28136..28585 - 450 WP_001023257.1 copper resistance protein -
CLQ43_RS27235 () 28819..30636 + 1818 WP_000925242.1 multicopper oxidase PcoA -
CLQ43_RS27240 () 30642..31532 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
CLQ43_RS27245 () 31572..31952 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CLQ43_RS27250 () 31957..32886 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CLQ43_RS27255 () 32941..33621 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
CLQ43_RS27260 () 33618..35018 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CLQ43_RS27265 () 35235..35669 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CLQ43_RS27270 () 35901..36080 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ43_RS27275 () 36141..37761 - 1621 Protein_30 ISL3 family transposase ISEc38 Transposase
CLQ43_RS27280 () 37823..38332 + 510 WP_031944101.1 aquaporin -
CLQ43_RS27285 () 38382..38879 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
CLQ43_RS27290 () 39211..39537 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CLQ43_RS27295 () 39534..40247 + 714 WP_004152093.1 arsenical resistance protein ArsH -
CLQ43_RS27300 () 40256..40801 + 546 WP_064152264.1 sigma-70 family RNA polymerase sigma factor -
CLQ43_RS27305 () 40877..41239 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CLQ43_RS27310 () 41264..43014 + 1751 Protein_37 arsenical pump-driving ATPase -
CLQ43_RS27315 () 43136..43672 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
CLQ43_RS27320 () 43705..44130 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CLQ43_RS27325 () 44143..45432 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CLQ43_RS27330 () 45480..47231 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CLQ43_RS27335 () 47249..47611 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CLQ43_RS27340 () 47661..48011 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CLQ43_RS27345 () 48369..48638 + 270 WP_004152102.1 hypothetical protein -
CLQ43_RS27350 () 48626..49201 + 576 WP_105446397.1 hypothetical protein -
CLQ43_RS27355 () 49232..49726 + 495 WP_044816180.1 hypothetical protein -
CLQ43_RS27360 () 49770..50138 + 369 WP_004152105.1 hypothetical protein -
CLQ43_RS27365 () 50172..50375 + 204 WP_004152106.1 hemolysin expression modulator Hha -
CLQ43_RS27370 () 50424..50681 + 258 WP_017899889.1 hypothetical protein -
CLQ43_RS27375 () 50898..51878 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
CLQ43_RS27385 () 52002..52211 + 210 WP_065896101.1 hypothetical protein -
CLQ43_RS27390 () 52387..52653 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CLQ43_RS27395 () 52641..53123 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CLQ43_RS27400 () 53324..54727 + 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
CLQ43_RS27405 () 54756..55388 - 633 WP_001567369.1 hypothetical protein -
CLQ43_RS27410 () 55618..56964 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
CLQ43_RS27415 () 57465..58202 - 738 Protein_57 IS3 family transposase ISKpn38 Transposase
CLQ43_RS27425 () 58252..58956 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ43_RS27430 () 59071..59307 - 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
CLQ43_RS27435 () 59304..59669 - 366 WP_001277466.1 mercury resistance co-regulator MerD -
CLQ43_RS27440 () 59687..61372 - 1686 WP_000209296.1 mercury(II) reductase -
CLQ43_RS27445 () 61411..61836 - 426 WP_000522996.1 organomercurial transporter MerC -
CLQ43_RS27450 () 61864..62139 - 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
CLQ43_RS27455 () 62155..62535 - 381 WP_001294654.1 mercuric ion transporter MerT -
CLQ43_RS27460 () 62607..63062 + 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
CLQ43_RS27465 () 63172..64262 - 1091 Protein_66 IS3 family transposase ISEc36 Transposase
CLQ43_RS27470 () 64739..65011 + 273 WP_000333416.1 His-Xaa-Ser system protein HxsD -
CLQ43_RS27475 () 65011..66399 + 1389 WP_004118216.1 His-Xaa-Ser system radical SAM maturase HxsB -
CLQ43_RS27480 () 66392..67504 + 1113 WP_000005560.1 His-Xaa-Ser system radical SAM maturase HxsC -
CLQ43_RS27485 () 67501..68136 + 636 WP_004118217.1 His-Xaa-Ser repeat protein HxsA -
CLQ43_RS27490 () 68693..69070 + 378 WP_004114613.1 IS66 family transposase ISSgsp1 Transposase
CLQ43_RS27495 () 69067..69414 + 348 WP_004152557.1 IS66 family transposase ISCfr14 Transposase
CLQ43_RS27500 () 69464..71001 + 1538 Protein_73 IS66 family transposase ISCfr14 Transposase
CLQ43_RS27505 () 71039..71416 + 378 Protein_74 IS66 family transposase ISEc22 Transposase
CLQ43_RS27510 () 73237..74970 - 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
CLQ43_RS27515 () 74978..75925 - 948 WP_004118225.1 acetamidase/formamidase family protein -
CLQ43_RS27520 () 75970..77574 - 1605 WP_004152278.1 ABC transporter substrate-binding protein -
CLQ43_RS27525 () 77587..78507 - 921 WP_004118227.1 ABC transporter permease -
CLQ43_RS27530 () 78507..79355 - 849 WP_004152279.1 ABC transporter permease -
CLQ43_RS27535 () 79352..79945 - 594 WP_004118229.1 ANTAR domain-containing protein -
CLQ43_RS27540 () 79942..81069 - 1128 WP_004118840.1 transporter substrate-binding protein -
CLQ43_RS27545 () 81354..81521 - 168 WP_004118231.1 integrase -
CLQ43_RS29320 () 81450..81662 + 213 WP_161989521.1 hypothetical protein -
CLQ43_RS27550 () 81663..82148 + 486 Protein_84 IS21 family transposase ISEc62 Transposase
CLQ43_RS27555 () 82624..83145 + 522 WP_004118235.1 putative RNA polymerase sigma factor FecI VF
CLQ43_RS27560 () 83142..84095 + 954 WP_004118237.1 fec operon regulator FecR -
CLQ43_RS27565 () 84181..86505 + 2325 WP_004152280.1 Fe(3+) dicitrate transport protein FecA -
CLQ43_RS27570 () 86550..87452 + 903 WP_004118241.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
CLQ43_RS27575 () 87449..88447 + 999 WP_004118243.1 Fe(3+) dicitrate transport system permease protein FecC VF
CLQ43_RS27580 () 88444..89400 + 957 WP_004152281.1 Fe(3+) dicitrate transport system permease protein FecD VF
CLQ43_RS27585 () 89401..90168 + 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
CLQ43_RS27590 () 90267..90560 + 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
CLQ43_RS27595 () 90635..90862 + 228 Protein_93 IS66 family transposase -
CLQ43_RS27600 () 90891..91133 - 243 WP_071527925.1 EAL domain-containing protein -
CLQ43_RS27605 () 91431..92435 - 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
CLQ43_RS27610 () 92839..93849 - 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
CLQ43_RS27620 () 94310..95392 + 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
CLQ43_RS27625 () 95514..98588 + 3075 WP_004152287.1 beta-galactosidase -
CLQ43_RS27630 () 98640..99893 + 1254 WP_003846917.1 lactose permease -
CLQ43_RS27635 () 99985..100954 + 970 Protein_100 IS5 family transposase IS903B Transposase
CLQ43_RS27640 () 101599..103908 + 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
CLQ43_RS27645 () 103912..105228 + 1317 WP_004152291.1 ATP-binding protein -
CLQ43_RS27650 () 105225..107420 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
CLQ43_RS27665 () 108867..109724 - 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
CLQ43_RS27670 () 109717..109794 - 78 WP_004171457.1 RepA leader peptide Tap -
CLQ43_RS27675 () 110011..110289 - 279 WP_004199332.1 replication regulatory protein RepA -
CLQ43_RS27680 () 110610..111089 - 480 WP_009485932.1 Phospholipase D VF
CLQ43_RS27685 () 111430..111708 - 279 WP_004152296.1 bacteriocin immunity protein -
CLQ43_RS27690 () 111710..114031 - 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
CLQ43_RS27695 () 114238..115458 + 1221 WP_000343760.1 ISL3 family transposase ISKox3 Transposase
CLQ43_RS27700 () 115712..116257 + 546 WP_004178052.1 hypothetical protein -
CLQ43_RS27705 () 116472..116819 - 348 WP_004152301.1 hypothetical protein -
CLQ43_RS27710 () 116839..117435 - 597 WP_004178053.1 fertility inhibition protein FinO -
CLQ43_RS27715 () 117593..118318 - 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
CLQ43_RS27720 () 118398..123661 - 5264 Protein_115 Multifunctional conjugation protein TraI Relaxase
CLQ43_RS27725 () 123661..125970 - 2310 Protein_116 type IV conjugative transfer system coupling protein TraD -
CLQ43_RS27730 () 126330..127061 - 732 WP_004152629.1 complement resistance protein TraT -
CLQ43_RS27735 () 127251..127778 - 528 WP_004153030.1 hypothetical protein -
CLQ43_RS27740 () 127784..130633 - 2850 WP_004178054.1 conjugal transfer mating pair stabilization protein TraG -
CLQ43_RS27745 () 130633..132003 - 1371 WP_004178055.1 conjugal transfer protein TraH -
CLQ43_RS27750 () 131990..132418 - 429 WP_004152689.1 hypothetical protein -
CLQ43_RS27755 () 132411..132983 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CLQ43_RS27760 () 132955..133194 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
CLQ43_RS27765 () 133205..133957 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
CLQ43_RS27770 () 133978..134304 - 327 WP_004152685.1 hypothetical protein -
CLQ43_RS27780 () 134532..134768 - 237 WP_004152683.1 conjugal transfer protein TrbE -
CLQ43_RS27785 () 134800..136755 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CLQ43_RS27790 () 136803..137441 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
CLQ43_RS27795 () 137454..138446 - 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
CLQ43_RS27800 () 138457..139083 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
CLQ43_RS27805 () 139083..139472 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
CLQ43_RS27810 () 139472..142111 - 2640 WP_004152592.1 type IV secretion system protein TraC -
CLQ43_RS27815 () 142183..142581 - 399 WP_004153071.1 hypothetical protein -
CLQ43_RS27825 () 142877..143281 - 405 WP_004152594.1 hypothetical protein -
CLQ43_RS27830 () 143348..143665 - 318 WP_004152595.1 hypothetical protein -
CLQ43_RS27835 () 143666..143884 - 219 WP_004171484.1 hypothetical protein -
CLQ43_RS27840 () 143908..144198 - 291 WP_004152596.1 hypothetical protein -
CLQ43_RS27845 () 144203..144613 - 411 WP_004152597.1 lipase chaperone -
CLQ43_RS27850 () 144745..145314 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
CLQ43_RS27855 () 145337..145933 - 597 WP_004152599.1 conjugal transfer protein TraP -
CLQ43_RS27860 () 145926..147350 - 1425 WP_004152600.1 conjugal transfer protein TraB -
CLQ43_RS27865 () 147350..148090 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
CLQ43_RS27870 () 148077..148643 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
CLQ43_RS27875 () 148663..148968 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
CLQ43_RS27880 () 148982..149350 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
CLQ43_RS27885 () 149404..149775 - 372 WP_004208838.1 TraY domain-containing protein -
CLQ43_RS27890 () 149859..150545 - 687 WP_011977735.1 transcriptional regulator TraJ family protein -
CLQ43_RS27895 () 150768..151160 - 393 WP_004178062.1 relaxosome protein TraM -
CLQ43_RS27900 () 151594..152079 + 486 WP_004178063.1 hypothetical protein VF
CLQ43_RS27905 () 152112..152441 - 330 WP_011977736.1 hypothetical protein -
CLQ43_RS27910 () 152474..153295 - 822 WP_004178064.1 DUF945 domain-containing protein -
CLQ43_RS27930 () 154129..154542 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
CLQ43_RS27935 () 154543..154821 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CLQ43_RS27940 () 154811..155131 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ43_RS27945 () 155212..155436 - 225 WP_004152719.1 hypothetical protein -
CLQ43_RS27950 () 155447..155659 - 213 WP_004152718.1 hypothetical protein -
CLQ43_RS27955 () 155720..156076 - 357 WP_004152717.1 hypothetical protein -
CLQ43_RS27965 () 156712..157062 - 351 WP_004152758.1 hypothetical protein -
CLQ43_RS27970 () 157059..157331 - 273 WP_004152759.1 hypothetical protein -
CLQ43_RS27975 () 158031..158192 - 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
CLQ43_RS27980 () 158264..159343 + 1080 WP_004220208.1 IS481 family transposase ISKpn28 Transposase
CLQ43_RS27990 () 159521..159895 - 375 WP_004152638.1 hypothetical protein -
CLQ43_RS27995 () 159951..160277 - 327 WP_004152639.1 hypothetical protein -
CLQ43_RS28000 () 160274..161002 - 729 WP_064148031.1 plasmid SOS inhibition protein A -
CLQ43_RS28005 () 160999..161430 - 432 WP_004194235.1 conjugation system SOS inhibitor PsiB -
CLQ43_RS28010 () 161497..163533 - 2037 WP_004178066.1 ParB/RepB/Spo0J family partition protein -
CLQ43_RS28015 () 163603..163851 - 249 WP_004152643.1 DUF905 domain-containing protein -
CLQ43_RS28020 () 163900..164442 - 543 WP_004152644.1 single-stranded DNA-binding protein -
CLQ43_RS28035 () 165218..165781 - 564 WP_004152756.1 methyltransferase -
CLQ43_RS28040 () 165829..167184 - 1356 WP_065801336.1 DUF3560 domain-containing protein -
CLQ43_RS28045 () 167236..167466 - 231 WP_004198570.1 hypothetical protein -
CLQ43_RS28050 () 167558..167785 - 228 WP_004178072.1 hypothetical protein -
CLQ43_RS28060 () 168567..168884 - 318 WP_004118473.1 hypothetical protein -
CLQ43_RS28065 () 168919..169173 - 255 WP_004152754.1 DNA polymerase III subunit theta -
CLQ43_RS28070 () 169410..169835 - 426 WP_004118478.1 antirestriction protein -
CLQ43_RS28080 () 170356..170586 - 231 WP_004152753.1 hypothetical protein -
CLQ43_RS28085 () 170820..172307 - 1488 Protein_177 group II intron reverse transcriptase/maturase -
CLQ43_RS28095 () 172710..173135 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CLQ43_RS28100 () 173135..174406 + 1272 WP_004152715.1 Y-family DNA polymerase -
CLQ43_RS28105 () 174485..174700 + 216 Protein_180 type II toxin-antitoxin system Phd/YefM family antitoxin -
CLQ43_RS28110 () 174723..175921 - 1199 Protein_181 IS200-IS605 family transposase IS609 Transposase
CLQ43_RS28125 () 176928..177899 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
CLQ43_RS28130 () 177899..179065 - 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance