MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70973 bp
Accession: NZ_CP037951 Location: 3871268..3942240 Organism: Parashewanella tropica strain MEBiC05444 Replicon: chromosome
Accession: NZ_CP037951 Location: 3871268..3942240 Organism: Parashewanella tropica strain MEBiC05444 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E2H97_RS17040 () | 3866904..3868088 | + | 1185 | WP_133408246.1 | PDZ domain-containing protein | - |
| E2H97_RS17045 () | 3868097..3868867 | + | 771 | WP_133408247.1 | divergent polysaccharide deacetylase family protein | - |
| E2H97_RS17050 () | 3868839..3869090 | - | 252 | WP_133408248.1 | YkgJ family cysteine cluster protein | - |
| E2H97_RS17055 () | 3869277..3871187 | + | 1911 | WP_133408249.1 | hypothetical protein | - |
| E2H97_RS17060 () | 3871306..3871497 | + | 192 | WP_133408694.1 | hypothetical protein | - |
| E2H97_RS17065 () | 3871545..3871799 | - | 255 | WP_133408695.1 | helix-turn-helix domain-containing protein | - |
| E2H97_RS17070 () | 3871975..3872217 | + | 243 | WP_133408250.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E2H97_RS17075 () | 3872224..3872526 | + | 303 | WP_133408251.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E2H97_RS17080 () | 3873219..3873596 | - | 378 | WP_133408252.1 | hypothetical protein | - |
| E2H97_RS17085 () | 3873972..3874457 | - | 486 | WP_133408253.1 | hypothetical protein | - |
| E2H97_RS17090 () | 3874966..3875298 | + | 333 | WP_133408254.1 | TrbC/VirB2 family protein | - |
| E2H97_RS17095 () | 3875311..3875631 | + | 321 | WP_133408255.1 | Type IV secretion system protein virB3 | VF |
| E2H97_RS17100 () | 3875628..3878120 | + | 2493 | WP_133408256.1 | Type IV secretion system protein virB4 | VF |
| E2H97_RS17105 () | 3878117..3878752 | + | 636 | WP_133408257.1 | type IV secretion protein | - |
| E2H97_RS17110 () | 3878799..3879077 | + | 279 | WP_133408258.1 | EexN family lipoprotein | - |
| E2H97_RS17115 () | 3879083..3880099 | + | 1017 | WP_133408259.1 | type IV secretion system protein | - |
| E2H97_RS17120 () | 3880241..3880975 | + | 735 | WP_133408260.1 | Type IV secretion system protein virB8 | VF |
| E2H97_RS17125 () | 3880977..3881819 | + | 843 | WP_170308345.1 | Type IV secretion system protein virB9 | VF |
| E2H97_RS17130 () | 3881800..3882951 | + | 1152 | WP_170308346.1 | Type IV secretion system protein virB10 | VF |
| E2H97_RS17135 () | 3882929..3883990 | + | 1062 | WP_133408262.1 | Type IV secretion system protein VirB11 | VF |
| E2H97_RS17140 () | 3883987..3885840 | + | 1854 | WP_133408263.1 | Protein VirD4 | VF |
| E2H97_RS17145 () | 3885833..3887710 | + | 1878 | WP_133408264.1 | hypothetical protein | - |
| E2H97_RS17150 () | 3887688..3887861 | + | 174 | WP_133408265.1 | conjugal transfer protein TraD | - |
| E2H97_RS17155 () | 3887865..3888857 | + | 993 | WP_133408266.1 | DUF1738 domain-containing protein | - |
| E2H97_RS17160 () | 3888909..3889214 | - | 306 | WP_133408697.1 | hypothetical protein | - |
| E2H97_RS18885 () | 3889658..3889801 | - | 144 | WP_170308347.1 | hypothetical protein | - |
| E2H97_RS17165 () | 3889936..3890604 | - | 669 | WP_133408267.1 | hypothetical protein | - |
| E2H97_RS17170 () | 3890606..3890899 | - | 294 | WP_133408698.1 | hypothetical protein | - |
| E2H97_RS17175 () | 3890916..3891590 | - | 675 | WP_133408268.1 | hypothetical protein | - |
| E2H97_RS18890 () | 3891897..3892112 | + | 216 | WP_170308348.1 | DUF952 domain-containing protein | - |
| E2H97_RS17185 () | 3892296..3893417 | + | 1122 | WP_133408699.1 | cysteine desulfurase | - |
| E2H97_RS17190 () | 3893449..3894342 | - | 894 | WP_133408270.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| E2H97_RS17195 () | 3894332..3897778 | - | 3447 | WP_133408700.1 | ATP-binding protein | - |
| E2H97_RS17200 () | 3897783..3898724 | - | 942 | WP_133408271.1 | DUF4007 family protein | - |
| E2H97_RS17205 () | 3899077..3900654 | + | 1578 | WP_170308349.1 | DEAD/DEAH box helicase | - |
| E2H97_RS17210 () | 3900657..3902459 | + | 1803 | WP_133408273.1 | ATP-binding protein | - |
| E2H97_RS17215 () | 3902538..3902918 | + | 381 | WP_133408274.1 | hypothetical protein | - |
| E2H97_RS17220 () | 3902920..3903864 | + | 945 | WP_170308350.1 | phospholipase D family protein | - |
| E2H97_RS17225 () | 3903875..3906007 | + | 2133 | WP_133408276.1 | DUF262 domain-containing protein | - |
| E2H97_RS17230 () | 3906075..3908114 | - | 2040 | WP_133408277.1 | DNA phosphorothioation-associated putative methyltransferase | - |
| E2H97_RS17240 () | 3908410..3908973 | + | 564 | WP_133408279.1 | hypothetical protein | - |
| E2H97_RS17245 () | 3909126..3909509 | + | 384 | WP_133408280.1 | hypothetical protein | - |
| E2H97_RS17250 () | 3909506..3909883 | - | 378 | WP_133408281.1 | DUF2384 domain-containing protein | - |
| E2H97_RS17255 () | 3910131..3910409 | + | 279 | WP_133408282.1 | hypothetical protein | - |
| E2H97_RS17260 () | 3910499..3911635 | - | 1137 | WP_133408283.1 | helix-turn-helix transcriptional regulator | - |
| E2H97_RS17265 () | 3911838..3912314 | + | 477 | WP_133408284.1 | hypothetical protein | - |
| E2H97_RS17270 () | 3912375..3913064 | + | 690 | WP_133408285.1 | hypothetical protein | - |
| E2H97_RS18750 () | 3913152..3913529 | + | 378 | WP_148669342.1 | hypothetical protein | - |
| E2H97_RS17275 () | 3913565..3914881 | + | 1317 | WP_133408286.1 | type II toxin-antitoxin system HipA family toxin | - |
| E2H97_RS17280 () | 3915202..3915402 | + | 201 | WP_133408287.1 | hypothetical protein | - |
| E2H97_RS17285 () | 3915389..3915982 | + | 594 | WP_133408288.1 | hypothetical protein | - |
| E2H97_RS18910 () | 3916085..3916573 | + | 489 | WP_178074606.1 | hypothetical protein | - |
| E2H97_RS17295 () | 3916619..3916981 | + | 363 | WP_133408289.1 | hypothetical protein | - |
| E2H97_RS17300 () | 3917027..3917422 | + | 396 | WP_133408290.1 | hypothetical protein | - |
| E2H97_RS17305 () | 3917576..3918226 | + | 651 | WP_133408291.1 | hypothetical protein | - |
| E2H97_RS17310 () | 3918246..3919595 | + | 1350 | WP_133408292.1 | hypothetical protein | - |
| E2H97_RS17315 () | 3919588..3920034 | + | 447 | WP_133408293.1 | hypothetical protein | - |
| E2H97_RS17320 () | 3920046..3920480 | + | 435 | WP_133408294.1 | hypothetical protein | - |
| E2H97_RS17325 () | 3920671..3921279 | + | 609 | WP_133408295.1 | hypothetical protein | - |
| E2H97_RS17330 () | 3921299..3922891 | + | 1593 | WP_133408296.1 | hypothetical protein | - |
| E2H97_RS17335 () | 3922943..3923653 | + | 711 | WP_133408297.1 | NYN domain-containing protein | - |
| E2H97_RS17340 () | 3923650..3923983 | - | 334 | Protein_3364 | DNA-binding protein | - |
| E2H97_RS18895 () | 3924173..3924319 | - | 147 | WP_170308351.1 | hypothetical protein | - |
| E2H97_RS17345 () | 3924792..3925442 | - | 651 | WP_133408298.1 | relaxase/mobilization nuclease domain-containing protein | - |
| E2H97_RS17350 () | 3925536..3925871 | - | 336 | WP_133408299.1 | phosphotyrosine protein phosphatase | - |
| E2H97_RS17355 () | 3925883..3926458 | - | 576 | WP_170308352.1 | plasmid mobilization relaxosome protein MobC | - |
| E2H97_RS17360 () | 3926916..3927551 | + | 636 | WP_170308353.1 | helix-turn-helix domain-containing protein | - |
| E2H97_RS17365 () | 3927641..3928579 | - | 939 | WP_133408302.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| E2H97_RS17370 () | 3928649..3929167 | - | 519 | WP_133408303.1 | hypothetical protein | - |
| E2H97_RS17375 () | 3929470..3930744 | + | 1275 | WP_133408304.1 | MFS transporter | - |
| E2H97_RS17380 () | 3931018..3932247 | + | 1230 | WP_133408305.1 | PD-(D/E)XK nuclease family protein | - |
| E2H97_RS17385 () | 3932255..3933043 | - | 789 | WP_133408306.1 | alpha/beta hydrolase | - |
| E2H97_RS17390 () | 3933049..3933738 | - | 690 | WP_133408307.1 | SAM-dependent methyltransferase | - |
| E2H97_RS17395 () | 3933747..3934673 | - | 927 | WP_133408308.1 | HTH-type transcriptional regulator PgrR | VF |
| E2H97_RS17400 () | 3934702..3935226 | - | 525 | WP_170308211.1 | MFS transporter | - |
| E2H97_RS17405 () | 3935289..3935984 | - | 696 | WP_133408310.1 | MFS transporter | - |
| E2H97_RS17410 () | 3936526..3939204 | + | 2679 | WP_133408311.1 | toprim domain-containing protein | - |
| E2H97_RS17415 () | 3939201..3939410 | + | 210 | WP_121839211.1 | hypothetical protein | - |
| E2H97_RS17420 () | 3939410..3940594 | + | 1185 | WP_133408312.1 | hypothetical protein ; Integrase | Integrase |
| E2H97_RS17425 () | 3940883..3941824 | - | 942 | WP_133408313.1 | HNH endonuclease | - |
| E2H97_RS17435 () | 3942410..3943936 | - | 1527 | WP_133408314.1 | hypothetical protein | - |
| E2H97_RS17440 () | 3944037..3944225 | + | 189 | WP_133408315.1 | DUF2065 domain-containing protein | - |
| E2H97_RS17445 () | 3944300..3945595 | + | 1296 | WP_133408316.1 | adenylosuccinate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|