NZ_CP0379461..96016

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 96016 bp
Accession: NZ_CP037946        Location: 1..96016         Organism: Escherichia coli strain CFSAN027346       Replicon: plasmid pCFSAN027346-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EKI52_RS28955 () 563..1776 + 1214 WP_162908515.1 IS3 family transposase IS629 Transposase
EKI52_RS28960 () 1829..2125 - 297 Protein_1 IS3 family transposase ISKpn37 Transposase
EKI52_RS30385 () 2130..2219 - 90 Protein_2 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family -
EKI52_RS28965 () 2401..3588 - 1188 WP_000937603.1 IS91 family transposase ISEc37 Transposase
EKI52_RS30230 () 3618..3869 + 252 WP_024184130.1 hypothetical protein -
EKI52_RS28980 () 5307..7517 + 2211 WP_000592771.1 Catalase-peroxidase VF
EKI52_RS28985 () 7561..7950 + 390 WP_001172748.1 cytochrome b562 family protein -
EKI52_RS28990 () 8064..8831 + 768 Protein_8 IS3 family transposase -
EKI52_RS28995 () 8911..9306 - 396 WP_000445934.1 plasmid partitioning/stability family protein -
EKI52_RS29000 () 9306..10265 - 960 WP_000921957.1 plasmid segregation protein ParM -
EKI52_RS29005 () 10538..11440 + 903 WP_077249722.1 DUF1281 domain-containing protein -
EKI52_RS29010 () 11437..11748 + 312 WP_012680995.1 hypothetical protein -
EKI52_RS29015 () 11824..12507 + 684 WP_000086167.1 DNA methylase -
EKI52_RS29020 () 12507..12725 + 219 WP_001443814.1 hypothetical protein -
EKI52_RS29025 () 12737..13171 + 435 WP_000274418.1 DUF1380 family protein -
EKI52_RS30390 () 13216..13455 + 240 Protein_16 hypothetical protein -
EKI52_RS30395 () 13450..13698 + 249 Protein_17 conjugation system SOS inhibitor PsiB -
EKI52_RS29035 () 13695..14414 + 720 WP_001276261.1 plasmid SOS inhibition protein A -
EKI52_RS30400 () 14411..15008 + 598 Protein_19 hypothetical protein -
EKI52_RS29050 () 15470..15970 + 501 WP_000117628.1 antirestriction protein ArdA -
EKI52_RS30235 () 15972..16592 - 621 WP_162137195.1 hypothetical protein -
EKI52_RS29065 () 16698..17132 + 435 WP_000218854.1 hypothetical protein -
EKI52_RS29070 () 17225..17491 + 267 WP_001247865.1 hypothetical protein -
EKI52_RS29075 () 17556..18446 + 891 WP_000038351.1 Recombination-promoting nuclease RpnA VF
EKI52_RS29080 () 18446..18691 + 246 WP_012605149.1 hypothetical protein -
EKI52_RS29085 () 18722..18973 - 252 WP_000148286.1 helix-turn-helix domain-containing protein -
EKI52_RS30405 () 19032..19307 - 276 WP_001431784.1 hypothetical protein -
EKI52_RS29095 () 19552..20400 + 849 WP_001341408.1 DUF4942 domain-containing protein -
EKI52_RS29100 () 20486..20821 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
EKI52_RS29105 () 21053..21385 + 333 WP_001291056.1 hypothetical protein -
EKI52_RS29110 () 21397..24117 + 2721 WP_000991399.1 Protein TraI Relaxase
EKI52_RS29115 () 24338..24658 - 321 WP_001341409.1 hypothetical protein -
EKI52_RS29120 () 24697..25385 + 689 Protein_33 IS3 family transposase IS600 Transposase
EKI52_RS29125 () 25540..26696 + 1157 WP_085948186.1 IS3 family transposase ISSd1 Transposase
EKI52_RS29140 () 27905..28318 + 414 WP_136138333.1 DUF1449 family protein -
EKI52_RS29145 () 28366..28578 - 213 Protein_37 IS3 family transposase ISSfl10 Transposase
EKI52_RS30245 () 28617..28874 + 258 WP_000114001.1 hypothetical protein -
EKI52_RS29155 () 29122..33024 - 3903 WP_001034100.1 Serine protease EspP VF
EKI52_RS29160 () 33467..33640 - 174 Protein_40 IS66 family transposase -
EKI52_RS29165 () 33702..33914 + 213 Protein_41 IS3 family transposase ISSfl10 Transposase
EKI52_RS30250 () 33962..34381 - 420 WP_136139077.1 DUF1449 family protein -
EKI52_RS29180 () 34312..34986 + 675 WP_001341423.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29185 () 34983..35330 + 348 WP_000631725.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29190 () 35350..36902 + 1553 Protein_45 IS66 family transposase ISSfl3 Transposase
EKI52_RS29195 () 37181..38368 - 1188 WP_000937603.1 IS91 family transposase ISEc37 Transposase
EKI52_RS29200 () 38368..38733 - 366 WP_000091308.1 hypothetical protein -
EKI52_RS29210 () 38970..39317 + 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
EKI52_RS29215 () 39367..40899 + 1533 WP_000997978.1 IS66 family transposase ISEc8 Transposase
EKI52_RS29220 () 40962..41150 - 189 Protein_50 hypothetical protein -
EKI52_RS29225 () 41203..42201 - 999 WP_012680945.1 Lipid A biosynthesis myristoyltransferase VF
EKI52_RS29230 () 42275..43996 - 1722 WP_000550559.1 phosphoethanolamine transferase CptA -
EKI52_RS29235 () 44090..45196 - 1107 WP_000975743.1 glycosyltransferase family 4 protein -
EKI52_RS29240 () 45196..46017 - 822 WP_001302199.1 polysaccharide deacetylase family protein -
EKI52_RS29250 () 47491..48143 + 653 Protein_55 IS3 family transposase IS629 Transposase
EKI52_RS29260 () 48666..49181 + 516 WP_000839950.1 Hemolysin-activating lysine-acyltransferase HlyC VF
EKI52_RS29265 () 49183..52179 + 2997 WP_000217745.1 Hemolysin, chromosomal VF
EKI52_RS29270 () 52229..54349 + 2121 WP_000987096.1 Alpha-hemolysin translocation ATP-binding protein HlyB VF
EKI52_RS29275 () 54353..55792 + 1440 WP_001213545.1 Hemolysin secretion protein D, chromosomal VF
EKI52_RS29280 () 55859..56002 + 144 Protein_60 transcriptional regulator -
EKI52_RS29285 () 56006..56197 + 192 Protein_61 lipid II-degrading bacteriocin -
EKI52_RS29290 () 56205..56558 - 354 WP_000864810.1 colicin M immunity protein -
EKI52_RS29295 () 56731..57513 - 783 WP_001164205.1 site-specific integrase -
EKI52_RS29300 () 57515..57928 - 414 WP_000465041.1 hypothetical protein -
EKI52_RS29320 () 58488..58718 + 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
EKI52_RS29325 () 58715..59131 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EKI52_RS29330 () 59293..59838 - 546 WP_001165114.1 hypothetical protein -
EKI52_RS29335 () 59906..61062 + 1157 WP_085948186.1 IS3 family transposase ISSd1 Transposase
EKI52_RS30255 () 61103..61252 - 150 WP_000955366.1 hypothetical protein -
EKI52_RS29340 () 61867..62727 - 861 WP_000704534.1 putative protein YcjY VF
EKI52_RS29345 () 62855..63241 + 387 WP_001066949.1 tyrosine-type recombinase/integrase -
EKI52_RS29350 () 63295..63969 + 675 WP_001341423.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29355 () 63966..64313 + 348 WP_000631725.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29360 () 64333..65885 + 1553 Protein_74 IS66 family transposase ISSfl3 Transposase
EKI52_RS29365 () 65919..66278 - 360 Protein_75 DUF1449 family protein -
EKI52_RS29375 () 66545..67210 - 666 WP_000154135.1 hypothetical protein -
EKI52_RS29380 () 67351..67992 - 642 WP_000335839.1 transcription termination factor NusG -
EKI52_RS29390 () 68701..69732 + 1032 WP_000907857.1 replication initiation protein -
EKI52_RS29405 () 70692..80191 - 9500 Protein_79 Toxin B VF
EKI52_RS29410 () 80306..80536 - 231 WP_001443774.1 transposase -
EKI52_RS29415 () 80543..80951 + 409 Protein_81 IS3 family transposase -
EKI52_RS29420 () 81018..82518 - 1501 Protein_82 IS66 family transposase -
EKI52_RS29425 () 82530..83601 - 1072 Protein_83 IS3 family transposase -
EKI52_RS29430 () 83663..84819 + 1157 WP_085948186.1 IS3 family transposase ISSd1 Transposase
EKI52_RS29440 () 84863..84949 - 87 Protein_85 IS3 family transposase ISEc52 Transposase
EKI52_RS29445 () 85020..85406 - 387 Protein_86 IS66 family transposase ISEc23 Transposase
EKI52_RS29450 () 85493..85607 + 115 Protein_87 IS3 family transposase -
EKI52_RS29455 () 85658..87168 - 1511 Protein_88 ISL3 family transposase -
EKI52_RS29460 () 87788..88795 - 1008 Protein_89 IS91 family transposase ISEc37 Transposase
EKI52_RS29470 () 89386..90573 - 1188 WP_000937603.1 IS91 family transposase ISEc37 Transposase
EKI52_RS29475 () 90573..90938 - 366 WP_000091308.1 hypothetical protein -
EKI52_RS29485 () 91339..91728 - 390 Protein_92 IS91 family transposase ISMno23 Transposase
EKI52_RS29490 () 91762..93314 - 1553 Protein_93 IS66 family transposase ISSfl3 Transposase
EKI52_RS29495 () 93334..93681 - 348 WP_000631725.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29500 () 93678..94352 - 675 WP_001341423.1 IS66 family transposase ISSfl3 Transposase
EKI52_RS29505 () 94406..94633 - 228 WP_001341442.1 transposase -
EKI52_RS29510 () 94796..95773 - 978 WP_000361610.1 RepB family plasmid replication initiator protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance