MGE detailed information
MGE type: Prophage MGE length: 12185 bp
Accession: NZ_CP037945 Location: 2235436..2247620 Organism: Escherichia coli strain CFSAN027346 Replicon: chromosome
Accession: NZ_CP037945 Location: 2235436..2247620 Organism: Escherichia coli strain CFSAN027346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI52_RS11880 () | 2233041..2233766 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| EKI52_RS11885 () | 2233803..2234342 | - | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| EKI52_RS11890 () | 2234407..2234955 | - | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| EKI52_RS11895 () | 2235436..2236032 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| EKI52_RS11900 () | 2236510..2237112 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| EKI52_RS11905 () | 2238568..2239284 | + | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EKI52_RS11910 () | 2239304..2240410 | + | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| EKI52_RS11915 () | 2240475..2241455 | + | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EKI52_RS11920 () | 2241463..2242113 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| EKI52_RS30115 () | 2243166..2243318 | - | 153 | WP_001280445.1 | hypothetical protein | - |
| EKI52_RS11945 () | 2243403..2243600 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| EKI52_RS11950 () | 2243612..2244046 | - | 435 | WP_096955184.1 | hypothetical protein | - |
| EKI52_RS11955 () | 2244138..2245294 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| EKI52_RS11965 () | 2245364..2245738 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| EKI52_RS11970 () | 2245828..2246196 | - | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EKI52_RS11975 () | 2246359..2246580 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| EKI52_RS11980 () | 2246643..2247119 | - | 477 | WP_001186774.1 | RadC family protein | - |
| EKI52_RS11985 () | 2247135..2247620 | - | 486 | WP_000849588.1 | antirestriction protein | - |
| EKI52_RS11990 () | 2247675..2248493 | - | 819 | WP_001234622.1 | DUF945 domain-containing protein | - |
| EKI52_RS12000 () | 2248593..2248826 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| EKI52_RS12005 () | 2248905..2249360 | - | 456 | WP_133342163.1 | hypothetical protein | - |
| EKI52_RS12010 () | 2249436..2251794 | - | 2359 | Protein_2288 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|