MGE detailed information
MGE type: Prophage MGE length: 59642 bp
Accession: NZ_CP037941 Location: 5140277..5199918 Organism: Escherichia coli strain CFSAN027350 Replicon: chromosome
Accession: NZ_CP037941 Location: 5140277..5199918 Organism: Escherichia coli strain CFSAN027350 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI55_RS26165 () | 5135490..5137709 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| EKI55_RS26170 () | 5137820..5139232 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| EKI55_RS26175 () | 5139307..5140044 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| EKI55_RS26180 () | 5140277..5142535 | - | 2259 | WP_001281899.1 | DNA topoisomerase IV subunit A | - |
| EKI55_RS26185 () | 5143081..5143563 | - | 483 | WP_000183500.1 | GyrI-like domain-containing protein | - |
| EKI55_RS26190 () | 5143616..5144008 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| EKI55_RS26195 () | 5144160..5144819 | + | 660 | WP_001221502.1 | hypothetical protein | VF |
| EKI55_RS26200 () | 5144816..5146165 | + | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| EKI55_RS26205 () | 5146211..5146543 | - | 333 | WP_000912120.1 | DUF2645 family protein | - |
| EKI55_RS26210 () | 5146862..5147443 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| EKI55_RS26215 () | 5147474..5147788 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| EKI55_RS26220 () | 5147836..5149728 | - | 1893 | WP_032345138.1 | DNA topoisomerase IV subunit B | - |
| EKI55_RS26225 () | 5149757..5150338 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| EKI55_RS26230 () | 5150338..5151165 | - | 828 | WP_000444756.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| EKI55_RS26235 () | 5151190..5151612 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| EKI55_RS26240 () | 5151613..5152242 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| EKI55_RS26245 () | 5152447..5153928 | + | 1482 | WP_032345136.1 | outer membrane channel protein TolC | - |
| EKI55_RS26250 () | 5154076..5154747 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| EKI55_RS26255 () | 5154753..5155913 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| EKI55_RS26260 () | 5155951..5156739 | - | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| EKI55_RS26265 () | 5156882..5157655 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| EKI55_RS28925 () | 5157713..5157883 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| EKI55_RS26270 () | 5158144..5158797 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| EKI55_RS26275 () | 5159171..5159461 | + | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| EKI55_RS26280 () | 5159744..5160295 | + | 552 | WP_001272149.1 | hypothetical protein | VF |
| EKI55_RS26285 () | 5160355..5162859 | + | 2505 | WP_000277119.1 | hypothetical protein | VF |
| EKI55_RS26290 () | 5162875..5163624 | + | 750 | WP_001269825.1 | hypothetical protein | VF |
| EKI55_RS26295 () | 5163626..5164690 | + | 1065 | WP_001269793.1 | fimbrial protein | - |
| EKI55_RS26300 () | 5164733..5164933 | - | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| EKI55_RS26305 () | 5165202..5165842 | + | 641 | Protein_5027 | DUF1449 family protein | - |
| EKI55_RS26310 () | 5165869..5167530 | + | 1662 | Protein_5028 | flotillin family protein | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_7 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_7 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_7 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_7 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_9 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_9 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_9 | - | - |
| - () | 5167727..5167868 | - | 142 | NuclAT_9 | - | - |
| EKI55_RS26315 () | 5167769..5167828 | + | 60 | WP_100249846.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 5168103..5168244 | - | 142 | NuclAT_8 | - | - |
| - () | 5168103..5168244 | - | 142 | NuclAT_8 | - | - |
| - () | 5168103..5168244 | - | 142 | NuclAT_8 | - | - |
| - () | 5168103..5168244 | - | 142 | NuclAT_8 | - | - |
| EKI55_RS26320 () | 5168145..5168204 | + | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| EKI55_RS26325 () | 5168324..5169757 | - | 1434 | WP_032314658.1 | hypothetical protein | VF |
| EKI55_RS26330 () | 5169805..5172645 | - | 2841 | WP_001315860.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| EKI55_RS26335 () | 5172668..5173969 | - | 1302 | WP_000046264.1 | inorganic triphosphatase | - |
| EKI55_RS26340 () | 5174211..5174831 | + | 621 | WP_001125332.1 | SH3 domain-containing protein | - |
| EKI55_RS26345 () | 5174895..5176133 | + | 1239 | WP_000708470.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| EKI55_RS26350 () | 5176296..5177117 | - | 822 | WP_001305111.1 | undecaprenyl-diphosphate phosphatase | - |
| EKI55_RS26355 () | 5177207..5177575 | - | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| EKI55_RS26360 () | 5177680..5178297 | + | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| EKI55_RS26365 () | 5178310..5179242 | - | 933 | WP_000935206.1 | DNA-binding transcriptional activator TtdR | - |
| EKI55_RS26370 () | 5179449..5180360 | + | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| EKI55_RS26375 () | 5180357..5180962 | + | 606 | WP_000722957.1 | L(+)-tartrate dehydratase subunit beta | - |
| EKI55_RS26380 () | 5181010..5182473 | + | 1464 | WP_000804966.1 | L-tartrate/succinate antiporter | - |
| EKI55_RS26385 () | 5182516..5183529 | - | 1014 | WP_001264365.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| EKI55_RS26390 () | 5183767..5183982 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| EKI55_RS26395 () | 5184093..5185838 | + | 1746 | WP_000918826.1 | DNA primase | - |
| EKI55_RS26400 () | 5186033..5187874 | + | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| EKI55_RS26405 () | 5187953..5188459 | - | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| EKI55_RS26415 () | 5188759..5189604 | - | 846 | WP_001274557.1 | DUF4942 domain-containing protein | - |
| EKI55_RS26420 () | 5189689..5189886 | - | 198 | WP_000772026.1 | DUF957 domain-containing protein | - |
| EKI55_RS26425 () | 5189906..5190394 | - | 489 | WP_001054228.1 | hypothetical protein | - |
| EKI55_RS26430 () | 5190391..5190771 | - | 381 | WP_000854687.1 | TA system toxin CbtA family protein | Toxin Detail |
| EKI55_RS26435 () | 5190860..5191228 | - | 369 | WP_001443392.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EKI55_RS26440 () | 5191304..5191525 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| EKI55_RS26445 () | 5191588..5192064 | - | 477 | WP_001186728.1 | RadC family protein | - |
| EKI55_RS26450 () | 5192080..5192553 | - | 474 | WP_001444656.1 | antirestriction protein | - |
| EKI55_RS26455 () | 5192647..5192892 | - | 246 | WP_000680587.1 | hypothetical protein | - |
| EKI55_RS26460 () | 5192892..5193332 | - | 441 | Protein_5057 | DUF932 domain-containing protein | - |
| EKI55_RS26470 () | 5193711..5194867 | + | 1157 | WP_100699673.1 | IS3 family transposase ISSd1 | Transposase |
| EKI55_RS26475 () | 5194910..5196496 | - | 1587 | Protein_5059 | reverse transcriptase | - |
| EKI55_RS26480 () | 5197006..5197389 | - | 384 | Protein_5060 | DUF932 domain-containing protein | - |
| EKI55_RS26490 () | 5197609..5198019 | - | 411 | WP_000848829.1 | hypothetical protein | - |
| EKI55_RS26495 () | 5198035..5198277 | - | 243 | WP_000348967.1 | DNA polymerase III subunit gamma/tau | - |
| EKI55_RS29045 () | 5198287..5198712 | - | 426 | WP_000775502.1 | hypothetical protein | - |
| EKI55_RS26510 () | 5198848..5199918 | - | 1071 | WP_000102649.1 | hypothetical protein | VF |
| EKI55_RS26515 () | 5199915..5200820 | - | 906 | WP_000203527.1 | chemotaxis protein | - |
| EKI55_RS26520 () | 5200817..5203213 | - | 2397 | WP_032345170.1 | dynamin family protein | - |
| EKI55_RS26525 () | 5203431..5204303 | - | 873 | WP_032346681.1 | GTPase family protein | - |
| EKI55_RS26530 () | 5204634..5204816 | + | 183 | WP_000282124.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|