MGE detailed information
MGE type: Prophage MGE length: 81628 bp
Accession: NZ_CP037941 Location: 2746557..2828184 Organism: Escherichia coli strain CFSAN027350 Replicon: chromosome
Accession: NZ_CP037941 Location: 2746557..2828184 Organism: Escherichia coli strain CFSAN027350 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI55_RS13630 () | 2742323..2743234 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| EKI55_RS13635 () | 2743250..2744071 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| EKI55_RS13640 () | 2744210..2744998 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| EKI55_RS13645 () | 2744995..2745456 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| EKI55_RS13650 () | 2745514..2746560 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| EKI55_RS13655 () | 2746557..2747351 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| EKI55_RS13660 () | 2747660..2747863 | + | 204 | WP_000824186.1 | hypothetical protein | - |
| EKI55_RS13665 () | 2747841..2748308 | + | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| EKI55_RS13670 () | 2748385..2749503 | - | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| EKI55_RS13675 () | 2749472..2749741 | - | 270 | WP_000003742.1 | excisionase | - |
| EKI55_RS13680 () | 2749803..2752274 | - | 2472 | WP_000048520.1 | exonuclease | - |
| EKI55_RS13685 () | 2752367..2752558 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| EKI55_RS13690 () | 2752555..2752743 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| EKI55_RS13700 () | 2753306..2753491 | + | 186 | WP_001133046.1 | hypothetical protein | - |
| EKI55_RS13705 () | 2753678..2754067 | - | 390 | WP_000394511.1 | hypothetical protein | - |
| EKI55_RS13710 () | 2754209..2754364 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EKI55_RS13715 () | 2754641..2754928 | - | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EKI55_RS13720 () | 2754928..2755119 | - | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| EKI55_RS13725 () | 2755147..2755548 | - | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| EKI55_RS13730 () | 2755657..2755929 | + | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| EKI55_RS13735 () | 2755913..2756338 | + | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| EKI55_RS13740 () | 2756544..2756999 | - | 456 | WP_000273724.1 | hypothetical protein | - |
| EKI55_RS13745 () | 2757078..2758169 | + | 1092 | WP_001205823.1 | hypothetical protein | - |
| EKI55_RS13750 () | 2758176..2758922 | + | 747 | WP_000788750.1 | ATP-binding protein | - |
| EKI55_RS13755 () | 2758944..2759714 | + | 771 | WP_000451007.1 | DUF1627 domain-containing protein | - |
| EKI55_RS13760 () | 2759730..2760143 | + | 414 | WP_001151233.1 | DUF977 family protein | - |
| EKI55_RS13765 () | 2760495..2761268 | - | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| EKI55_RS13780 () | 2761873..2762028 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EKI55_RS13785 () | 2762196..2762474 | + | 279 | WP_001341388.1 | hypothetical protein | - |
| EKI55_RS13790 () | 2762476..2763525 | + | 1050 | WP_001265140.1 | DUF968 domain-containing protein | - |
| EKI55_RS13795 () | 2763538..2763909 | + | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EKI55_RS13800 () | 2763899..2764270 | + | 372 | WP_000090264.1 | antitermination protein | - |
| EKI55_RS13805 () | 2764422..2765240 | + | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| EKI55_RS13810 () | 2765527..2765723 | + | 197 | Protein_2635 | TrmB family transcriptional regulator | - |
| EKI55_RS13815 () | 2765861..2766574 | + | 714 | WP_099368381.1 | helix-turn-helix domain-containing protein | - |
| EKI55_RS13840 () | 2767342..2769192 | + | 1851 | WP_000874393.1 | SASA family carbohydrate esterase | - |
| EKI55_RS13845 () | 2769631..2769846 | + | 216 | WP_024182511.1 | class II holin family protein | - |
| EKI55_RS13855 () | 2770102..2770374 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| EKI55_RS13865 () | 2770534..2771067 | + | 534 | WP_001003120.1 | lysozyme | - |
| EKI55_RS13875 () | 2771622..2771708 | + | 87 | WP_032140280.1 | hypothetical protein | - |
| EKI55_RS13880 () | 2771710..2772204 | + | 495 | WP_001427182.1 | lysis protein | - |
| EKI55_RS13885 () | 2772201..2772425 | + | 225 | WP_000736096.1 | hypothetical protein | - |
| EKI55_RS13890 () | 2772794..2773021 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| EKI55_RS13895 () | 2773063..2773428 | + | 366 | WP_001427183.1 | HNH endonuclease | - |
| EKI55_RS13905 () | 2773720..2774283 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| EKI55_RS13910 () | 2774280..2775941 | + | 1662 | WP_032284585.1 | terminase large subunit | - |
| EKI55_RS13915 () | 2776005..2777942 | + | 1938 | WP_000173079.1 | phage major capsid protein | - |
| EKI55_RS13920 () | 2777987..2778208 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| EKI55_RS13925 () | 2778154..2780738 | + | 2585 | Protein_2650 | phage portal protein | - |
| EKI55_RS13930 () | 2780735..2781061 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| EKI55_RS13935 () | 2781071..2781421 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| EKI55_RS13940 () | 2781418..2781864 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| EKI55_RS13945 () | 2781861..2782205 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| EKI55_RS13950 () | 2782271..2782987 | + | 717 | WP_001275483.1 | immunoglobulin domain-containing protein | - |
| EKI55_RS13955 () | 2783002..2783376 | + | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| EKI55_RS13960 () | 2783472..2783681 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| EKI55_RS13965 () | 2783729..2786971 | + | 3243 | WP_000212980.1 | phage tail tape measure protein | - |
| EKI55_RS13970 () | 2786964..2787305 | + | 342 | WP_000807940.1 | phage tail protein | - |
| EKI55_RS13975 () | 2787305..2788003 | + | 699 | WP_001327694.1 | phage minor tail protein L | - |
| EKI55_RS13980 () | 2788009..2788752 | + | 744 | WP_045904127.1 | C40 family peptidase | - |
| EKI55_RS13985 () | 2788698..2789330 | + | 633 | WP_133374445.1 | tail assembly protein | - |
| EKI55_RS13990 () | 2789576..2793055 | + | 3480 | WP_133374422.1 | host specificity protein J | - |
| EKI55_RS13995 () | 2793124..2793747 | + | 624 | WP_001408020.1 | hypothetical protein | VF |
| EKI55_RS14000 () | 2793812..2795125 | + | 1314 | WP_133374423.1 | ISNCY family transposase KIS | Transposase |
| EKI55_RS14005 () | 2795127..2795396 | + | 270 | WP_001023435.1 | phage tail fiber C-terminal domain-containing protein | - |
| EKI55_RS14010 () | 2795510..2796085 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| EKI55_RS14015 () | 2796376..2796957 | + | 582 | WP_001118085.1 | hypothetical protein | VF |
| EKI55_RS14020 () | 2797025..2797660 | + | 636 | WP_012816780.1 | Isochorismate synthase MenF | VF |
| EKI55_RS14025 () | 2797788..2798846 | - | 1059 | WP_001299273.1 | Carbamoyl-phosphate synthase small chain | VF |
| EKI55_RS14030 () | 2798921..2799571 | - | 651 | WP_001144080.1 | 7-cyano-7-deazaguanine synthase | VF |
| EKI55_RS14035 () | 2799754..2800344 | + | 591 | WP_001132165.1 | hypothetical protein | VF |
| EKI55_RS14040 () | 2800618..2801481 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| EKI55_RS14045 () | 2801465..2802601 | - | 1137 | WP_000531601.1 | hypothetical protein | VF |
| EKI55_RS14050 () | 2802851..2804080 | + | 1230 | WP_000359438.1 | peptidase T | - |
| EKI55_RS14055 () | 2804226..2805347 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| EKI55_RS14060 () | 2805596..2806825 | + | 1230 | WP_000085258.1 | hypothetical protein ; Integrase | Integrase |
| EKI55_RS14065 () | 2807191..2807379 | + | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| EKI55_RS14070 () | 2807437..2808465 | + | 1029 | WP_032345527.1 | host cell division inhibitor Icd-like protein | - |
| EKI55_RS14075 () | 2808455..2808919 | + | 465 | WP_000336167.1 | hypothetical protein | - |
| EKI55_RS14080 () | 2808912..2809145 | + | 234 | WP_001204981.1 | hypothetical protein | - |
| EKI55_RS14085 () | 2809151..2809450 | + | 300 | WP_000770175.1 | DUF4222 domain-containing protein | - |
| EKI55_RS14090 () | 2809447..2810847 | + | 1401 | WP_000833618.1 | helicase RepA family protein | - |
| EKI55_RS14095 () | 2811048..2811221 | + | 174 | Protein_2684 | hypothetical protein | - |
| EKI55_RS14100 () | 2811217..2811525 | + | 309 | WP_032345515.1 | single-stranded DNA-binding protein | - |
| EKI55_RS14105 () | 2811536..2811808 | + | 273 | WP_000233304.1 | PerC family transcriptional regulator | - |
| EKI55_RS14115 () | 2811935..2812159 | + | 225 | WP_001132079.1 | hypothetical protein | - |
| EKI55_RS14120 () | 2812411..2812617 | + | 207 | WP_000796958.1 | hypothetical protein | - |
| EKI55_RS14125 () | 2812617..2813672 | + | 1056 | WP_000907455.1 | major capsid protein | - |
| EKI55_RS14130 () | 2813685..2814020 | + | 336 | WP_000380886.1 | head decoration protein | - |
| EKI55_RS14135 () | 2814033..2814446 | + | 414 | WP_000224599.1 | hypothetical protein | - |
| EKI55_RS14145 () | 2814652..2815194 | + | 543 | WP_001432354.1 | terminase small subunit | - |
| EKI55_RS14150 () | 2815450..2815731 | + | 282 | WP_000133424.1 | hypothetical protein | - |
| EKI55_RS14155 () | 2816333..2817793 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| EKI55_RS14160 () | 2817793..2818464 | - | 672 | WP_001265481.1 | hypothetical protein | VF |
| EKI55_RS14165 () | 2818632..2820002 | - | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| EKI55_RS14170 () | 2820006..2820647 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| EKI55_RS14175 () | 2820683..2821789 | - | 1107 | WP_001297484.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| EKI55_RS14180 () | 2821843..2822304 | - | 462 | WP_000476093.1 | phosphatase NudJ | - |
| EKI55_RS14185 () | 2822314..2822967 | - | 654 | WP_001248691.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| EKI55_RS14190 () | 2823139..2824389 | + | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| EKI55_RS14195 () | 2824492..2824815 | - | 324 | WP_001307134.1 | anti-adapter protein IraM | - |
| EKI55_RS28990 () | 2825068..2825112 | - | 45 | WP_120795380.1 | protein YmgK | - |
| EKI55_RS14200 () | 2825348..2825458 | - | 111 | WP_032141808.1 | hypothetical protein | - |
| EKI55_RS14205 () | 2825511..2825915 | - | 405 | WP_000373101.1 | DUF1398 domain-containing protein | - |
| EKI55_RS14210 () | 2826136..2826867 | - | 732 | WP_000332303.1 | IS607 family transposase ISAfe11 | Transposase |
| EKI55_RS14215 () | 2827072..2827476 | - | 405 | Protein_2707 | blue light-responsive regulator BluF | - |
| EKI55_RS14225 () | 2828224..2829057 | - | 834 | WP_077850513.1 | diguanylate phosphodiesterase | - |
| EKI55_RS14230 () | 2829371..2829607 | + | 237 | WP_000554144.1 | two-component-system connector protein YcgZ | - |
| EKI55_RS14235 () | 2829650..2829922 | + | 273 | WP_000857995.1 | two-component-system connector protein YmgA | - |
| EKI55_RS14240 () | 2829951..2830217 | + | 267 | WP_000888772.1 | biofilm/acid-resistance regulator AriR | - |
| EKI55_RS14245 () | 2830330..2830578 | + | 249 | WP_001065752.1 | hypothetical protein | - |
| EKI55_RS14250 () | 2830910..2832433 | + | 1524 | WP_032345436.1 | cyclic diguanylate phosphodiesterase | - |
| EKI55_RS14255 () | 2832565..2832783 | + | 219 | WP_001299921.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|