MGE detailed information
MGE type: IScluster/Tn MGE length: 29284 bp
Accession: NZ_CP037924 Location: 1333..30616 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Accession: NZ_CP037924 Location: 1333..30616 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKN05_RS23440 (EKN05_023450) | 1..760 | - | 760 | Protein_0 | type 3 secretion system effector OspC4 | - |
| EKN05_RS23445 (EKN05_023455) | 1333..2007 | + | 675 | WP_010921654.1 | IS66-like element accessory protein TnpA | - |
| EKN05_RS23450 (EKN05_023460) | 2004..2354 | + | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS23455 (EKN05_023465) | 2351..3947 | + | 1597 | Protein_3 | IS66-like element ISSfl3 family transposase | - |
| EKN05_RS25285 | 4201..4365 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| EKN05_RS23480 (EKN05_023490) | 5267..5551 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EKN05_RS23485 (EKN05_023495) | 5539..6024 | + | 486 | WP_010921647.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EKN05_RS23490 (EKN05_023500) | 6197..6478 | - | 282 | Protein_7 | IS4/IS5 family transposase | - |
| EKN05_RS23495 (EKN05_023505) | 6545..7701 | + | 1157 | WP_136350434.1 | IS3-like element IS600 family transposase | - |
| EKN05_RS23500 (EKN05_023510) | 7816..9044 | + | 1229 | WP_094081542.1 | IS3-like element IS2 family transposase | - |
| EKN05_RS23505 (EKN05_023515) | 9082..9225 | + | 144 | Protein_10 | DUF3440 domain-containing protein | - |
| EKN05_RS23510 (EKN05_023520) | 9210..9848 | + | 639 | WP_000502855.1 | ParB N-terminal domain-containing protein | - |
| EKN05_RS23515 (EKN05_023525) | 10076..10462 | + | 387 | Protein_12 | hypothetical protein | - |
| EKN05_RS23520 (EKN05_023530) | 10493..10966 | + | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| EKN05_RS23525 (EKN05_023535) | 11055..11920 | + | 866 | WP_086020993.1 | IS5-like element ISSfl7 family transposase | - |
| EKN05_RS26145 | 11957..12088 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| EKN05_RS23530 (EKN05_023540) | 12170..12363 | + | 194 | Protein_16 | HNH endonuclease signature motif containing protein | - |
| EKN05_RS23535 (EKN05_023545) | 12506..12727 | + | 222 | Protein_17 | transposase | - |
| EKN05_RS23540 (EKN05_023550) | 12748..12810 | - | 63 | Protein_18 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS23545 (EKN05_023555) | 13260..14672 | + | 1413 | WP_010921643.1 | type 3 secretion system effector OspC1 | - |
| EKN05_RS23550 (EKN05_023560) | 14776..14925 | - | 150 | Protein_20 | IS1 family transposase | - |
| EKN05_RS23555 (EKN05_023565) | 15001..16698 | + | 1698 | WP_010921642.1 | type III secretion system effector OspD3 | - |
| EKN05_RS23565 (EKN05_023575) | 16815..16934 | + | 120 | Protein_22 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS23575 (EKN05_023585) | 17101..17373 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| EKN05_RS23580 (EKN05_023590) | 17354..18562 | + | 1209 | WP_010921626.1 | IS91 family transposase | - |
| EKN05_RS23585 (EKN05_023595) | 18938..19654 | - | 717 | Protein_25 | IS21-like element IS100kyp family helper ATPase IstB | - |
| EKN05_RS23590 (EKN05_023605) | 19852..21060 | + | 1209 | Protein_26 | IS3 family transposase | - |
| EKN05_RS23600 (EKN05_023615) | 21163..21660 | + | 498 | Protein_27 | transposase | - |
| EKN05_RS23605 (EKN05_023620) | 21701..21892 | + | 192 | Protein_28 | ATP-binding protein | - |
| EKN05_RS23610 (EKN05_023625) | 21986..22195 | - | 210 | Protein_29 | peptidoglycan-binding protein | - |
| EKN05_RS23620 (EKN05_023635) | 23698..25422 | - | 1725 | WP_010921638.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| EKN05_RS23625 (EKN05_023640) | 25850..27547 | - | 1698 | WP_010921637.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| EKN05_RS23630 (EKN05_023645) | 27875..28054 | + | 180 | Protein_33 | transposase | - |
| EKN05_RS23635 (EKN05_023650) | 28071..28761 | - | 691 | Protein_34 | IS1 family transposase | - |
| EKN05_RS23640 (EKN05_023655) | 28955..29986 | - | 1032 | WP_010921634.1 | IS630-like element IS630 family transposase | - |
| EKN05_RS23650 (EKN05_023670) | 31122..32321 | - | 1200 | WP_010921680.1 | IS91 family transposase | - |
| EKN05_RS23655 (EKN05_023675) | 32331..32519 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|