MGE detailed information
MGE type: Prophage MGE length: 24941 bp
Accession: NZ_CP037910 Location: 788934..813874 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Accession: NZ_CP037910 Location: 788934..813874 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J56_RS03835 () | 784467..786170 | + | 1704 | WP_000083057.1 | hydrogenase 2 large subunit | - |
| E1J56_RS03840 () | 786170..786664 | + | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| E1J56_RS03845 () | 786657..787145 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| E1J56_RS03850 () | 787138..787479 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| E1J56_RS03855 () | 787492..787740 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| E1J56_RS03860 () | 787863..788729 | - | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| E1J56_RS03865 () | 788934..790793 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| E1J56_RS03870 () | 791168..791865 | + | 698 | Protein_757 | IS1 family transposase | - |
| E1J56_RS03875 () | 791882..792850 | + | 969 | Protein_758 | hypothetical protein | VF |
| E1J56_RS25550 () | 792872..793249 | + | 378 | WP_002431284.1 | hypothetical protein | VF |
| E1J56_RS25555 () | 793261..793620 | + | 360 | WP_001338796.1 | hypothetical protein | VF |
| E1J56_RS03885 () | 793622..794686 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| E1J56_RS03890 () | 794729..794929 | - | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| E1J56_RS03895 () | 795198..795791 | + | 594 | WP_000599943.1 | DUF1449 family protein | - |
| E1J56_RS03900 () | 795825..796522 | + | 698 | Protein_764 | IS1 family transposase IS1G | Transposase |
| E1J56_RS03905 () | 796686..798551 | - | 1866 | WP_063078134.1 | DUF262 domain-containing protein | - |
| E1J56_RS03910 () | 798926..800154 | + | 1229 | WP_169050813.1 | IS3 family transposase IS2 | Transposase |
| E1J56_RS03915 () | 800293..800841 | + | 549 | WP_096263603.1 | fimbrial protein YehD | - |
| E1J56_RS03920 () | 800897..801577 | + | 681 | WP_053270475.1 | hypothetical protein | VF |
| E1J56_RS03925 () | 801595..804081 | + | 2487 | WP_111970038.1 | hypothetical protein | VF |
| E1J56_RS03930 () | 804093..805112 | + | 1020 | WP_136655365.1 | type 1 fimbrial protein | - |
| E1J56_RS03935 () | 805297..805518 | + | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E1J56_RS03940 () | 805518..805895 | + | 378 | WP_053291281.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| E1J56_RS03950 () | 806005..806220 | - | 216 | Protein_773 | IS3 family transposase IS911 | Transposase |
| E1J56_RS03955 () | 806406..807668 | - | 1263 | WP_136655366.1 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS03965 () | 808047..808754 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| E1J56_RS25855 () | 808907..808990 | + | 84 | WP_211180506.1 | protein YqgH | - |
| E1J56_RS03970 () | 809152..811287 | + | 2136 | WP_000839760.1 | ornithine decarboxylase | - |
| E1J56_RS03975 () | 811337..812593 | - | 1257 | WP_001299430.1 | nucleoside permease NupG | - |
| E1J56_RS03980 () | 812795..813874 | - | 1080 | WP_000760323.1 | membrane-bound lytic murein transglycosylase MltC | - |
| E1J56_RS03985 () | 813939..814214 | - | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| E1J56_RS03990 () | 814242..815294 | - | 1053 | WP_001321419.1 | A/G-specific adenine glycosylase | - |
| E1J56_RS03995 () | 815455..816174 | + | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| E1J56_RS04000 () | 816174..816500 | + | 327 | WP_001107564.1 | YggL family protein | - |
| E1J56_RS04005 () | 816684..817403 | + | 720 | WP_136655367.1 | DUF2884 domain-containing protein | - |
| E1J56_RS04010 () | 817579..818625 | + | 1047 | WP_000394131.1 | L-asparaginase 2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|