MGE detailed information
MGE type: Genomic_island MGE length: 35974 bp
Accession: NZ_CP037910 Location: 4209992..4245965 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Accession: NZ_CP037910 Location: 4209992..4245965 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J56_RS20685 () | 4206037..4207068 | - | 1032 | WP_000416157.1 | LacI family DNA-binding transcriptional regulator | - |
| E1J56_RS20690 () | 4207339..4207782 | + | 444 | WP_000916811.1 | PTS sugar transporter subunit IIA | - |
| E1J56_RS20695 () | 4207798..4208085 | + | 288 | WP_000705928.1 | PTS sugar transporter subunit IIB | - |
| E1J56_RS20700 () | 4208098..4209354 | + | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| E1J56_RS20710 () | 4209570..4209854 | - | 285 | WP_000436076.1 | transposase | - |
| E1J56_RS20715 () | 4209992..4210375 | - | 384 | WP_021533156.1 | hypothetical protein | - |
| E1J56_RS20720 () | 4210414..4211622 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| E1J56_RS20725 () | 4211733..4212701 | - | 969 | WP_112930141.1 | IS5 family transposase IS903 | Transposase |
| E1J56_RS20730 () | 4212767..4213534 | + | 768 | WP_040062538.1 | hypothetical protein | - |
| E1J56_RS20735 () | 4213581..4213967 | + | 387 | Protein_4030 | IS5 family transposase ISPrst3 | Transposase |
| E1J56_RS20740 () | 4214745..4214855 | + | 111 | WP_113772190.1 | hypothetical protein | - |
| E1J56_RS20745 () | 4215069..4215770 | - | 702 | WP_040064658.1 | DUF4396 domain-containing protein | - |
| E1J56_RS20750 () | 4215870..4216037 | + | 168 | WP_197092482.1 | hypothetical protein | - |
| E1J56_RS20755 () | 4216079..4217047 | - | 969 | WP_162722063.1 | IS5 family transposase IS903B | Transposase |
| E1J56_RS20760 () | 4217125..4217316 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| E1J56_RS20765 () | 4217369..4217602 | - | 234 | WP_063100431.1 | hypothetical protein | - |
| E1J56_RS20770 () | 4217699..4218322 | - | 624 | WP_042850840.1 | hypothetical protein | - |
| E1J56_RS20775 () | 4218411..4218911 | - | 501 | WP_032216520.1 | hypothetical protein | - |
| E1J56_RS20785 () | 4219179..4219409 | - | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| E1J56_RS20790 () | 4219478..4220038 | - | 561 | WP_032216519.1 | hypothetical protein | - |
| E1J56_RS20795 () | 4220296..4220862 | - | 567 | WP_095784821.1 | inovirus-type Gp2 protein | - |
| E1J56_RS20800 () | 4222402..4224006 | - | 1605 | WP_001083419.1 | DUF3987 domain-containing protein | - |
| E1J56_RS20805 () | 4224333..4225064 | - | 732 | WP_112930144.1 | inovirus Gp2 family protein | - |
| E1J56_RS20810 () | 4226634..4227764 | - | 1131 | WP_000147748.1 | hypothetical protein | - |
| E1J56_RS20815 () | 4227949..4228833 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| E1J56_RS20820 () | 4229036..4229716 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| E1J56_RS20825 () | 4229864..4230541 | + | 678 | WP_063073422.1 | hypothetical protein | - |
| E1J56_RS20830 () | 4230547..4230699 | + | 153 | WP_001696589.1 | DUF905 family protein | - |
| E1J56_RS20835 () | 4230800..4231618 | + | 819 | WP_096211214.1 | DUF945 domain-containing protein | - |
| E1J56_RS20840 () | 4231710..4232195 | + | 486 | WP_000213716.1 | antirestriction protein | - |
| E1J56_RS20845 () | 4232211..4232687 | + | 477 | WP_001186780.1 | RadC family protein | - |
| E1J56_RS20850 () | 4232750..4232971 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| E1J56_RS20855 () | 4232990..4233634 | + | 645 | WP_045146861.1 | hypothetical protein | - |
| E1J56_RS20860 () | 4233684..4234052 | + | 369 | WP_063112944.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| E1J56_RS20865 () | 4234142..4234519 | + | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| E1J56_RS20870 () | 4234516..4234665 | + | 150 | Protein_4056 | hypothetical protein | - |
| E1J56_RS20875 () | 4234741..4234938 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| E1J56_RS20880 () | 4235023..4235865 | + | 843 | WP_001529559.1 | DUF4942 domain-containing protein | - |
| E1J56_RS20885 () | 4236614..4238152 | + | 1539 | WP_001751945.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| E1J56_RS20895 () | 4238518..4239852 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| E1J56_RS20900 () | 4239932..4242079 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| E1J56_RS20905 () | 4242138..4243595 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| E1J56_RS20910 () | 4243832..4245349 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| E1J56_RS20915 () | 4245468..4245641 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| E1J56_RS20920 () | 4245669..4245965 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| E1J56_RS20925 () | 4246192..4246464 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| E1J56_RS20930 () | 4246476..4246706 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| E1J56_RS20935 () | 4246887..4248518 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| E1J56_RS20940 () | 4248515..4249234 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|