MGE detailed information
MGE type: Prophage MGE length: 55244 bp
Accession: NZ_CP037910 Location: 3606713..3661956 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Accession: NZ_CP037910 Location: 3606713..3661956 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J56_RS17645 () | 3602084..3602803 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| E1J56_RS17650 () | 3603330..3604184 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| E1J56_RS17655 () | 3604410..3605735 | + | 1326 | WP_001046306.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| E1J56_RS17660 () | 3605844..3606080 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| E1J56_RS17665 () | 3606092..3606685 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| E1J56_RS17670 () | 3606713..3607410 | - | 698 | Protein_3443 | IS1 family transposase IS1R | Transposase |
| E1J56_RS17675 () | 3607724..3608266 | + | 543 | WP_001752155.1 | hypothetical protein | VF |
| E1J56_RS17680 () | 3608341..3608928 | + | 588 | WP_000730972.1 | hypothetical protein | VF |
| E1J56_RS17685 () | 3608986..3609654 | + | 669 | WP_000716398.1 | hypothetical protein | VF |
| E1J56_RS17690 () | 3609680..3612205 | + | 2526 | WP_001131096.1 | hypothetical protein | VF |
| E1J56_RS17695 () | 3612195..3613838 | + | 1644 | WP_021546761.1 | hypothetical protein | VF |
| E1J56_RS17700 () | 3613807..3614517 | + | 711 | WP_001350485.1 | hypothetical protein | VF |
| E1J56_RS17705 () | 3614830..3615159 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| E1J56_RS17710 () | 3615154..3615366 | - | 213 | WP_000998337.1 | hypothetical protein | - |
| E1J56_RS17720 () | 3615491..3616188 | + | 698 | Protein_3452 | IS1 family transposase | - |
| E1J56_RS17730 () | 3616747..3617283 | + | 537 | WP_021534265.1 | 5'-deoxynucleotidase | - |
| E1J56_RS17735 () | 3617274..3617636 | + | 363 | WP_001242749.1 | phage protein | - |
| E1J56_RS17740 () | 3617636..3617941 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| E1J56_RS17745 () | 3617941..3618108 | + | 168 | Protein_3456 | IS607 family transposase ISSto13 | Transposase |
| E1J56_RS17750 () | 3618117..3618814 | - | 698 | Protein_3457 | IS1 family transposase IS1R | Transposase |
| E1J56_RS17755 () | 3618882..3619961 | + | 1080 | WP_136655467.1 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS17760 () | 3620007..3620987 | + | 981 | WP_073481441.1 | IS5 family transposase ISKpn26 | Transposase |
| E1J56_RS17765 () | 3621135..3624251 | - | 3117 | WP_136655468.1 | HsdR family type I site-specific deoxyribonuclease | - |
| E1J56_RS17770 () | 3624373..3625575 | - | 1203 | WP_136655469.1 | restriction endonuclease subunit S | - |
| E1J56_RS17775 () | 3625572..3627128 | - | 1557 | WP_072650529.1 | type I restriction-modification system subunit M | - |
| E1J56_RS17780 () | 3627394..3628266 | + | 873 | WP_072652309.1 | GTPase family protein | - |
| E1J56_RS17785 () | 3628637..3631483 | + | 2847 | WP_063073033.1 | Ag43/Cah family autotransporter adhesin | - |
| E1J56_RS17795 () | 3631811..3632629 | + | 819 | WP_001234702.1 | DUF945 domain-containing protein | - |
| E1J56_RS17800 () | 3632720..3633205 | + | 486 | WP_000214316.1 | antirestriction protein | - |
| E1J56_RS17805 () | 3633220..3633696 | + | 477 | WP_001186742.1 | RadC family protein | - |
| E1J56_RS17810 () | 3633765..3633986 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| E1J56_RS17815 () | 3634001..3634645 | + | 645 | WP_039025881.1 | hypothetical protein | - |
| E1J56_RS17820 () | 3634695..3635063 | + | 369 | WP_039025882.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| E1J56_RS17825 () | 3635152..3635529 | + | 378 | WP_039025883.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| E1J56_RS17830 () | 3635526..3636014 | + | 489 | Protein_3472 | hypothetical protein | - |
| E1J56_RS17835 () | 3636034..3636231 | + | 198 | WP_000772024.1 | DUF957 domain-containing protein | - |
| E1J56_RS17840 () | 3636328..3637176 | + | 849 | WP_039025884.1 | DUF4942 domain-containing protein | - |
| E1J56_RS17845 () | 3637269..3638588 | - | 1320 | WP_000144688.1 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS17850 () | 3638814..3639977 | - | 1164 | WP_000051887.1 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS17855 () | 3640109..3640806 | + | 698 | Protein_3477 | IS1 family transposase IS1R | Transposase |
| E1J56_RS17860 () | 3640824..3641117 | - | 294 | Protein_3478 | inovirus-type Gp2 protein | - |
| E1J56_RS17870 () | 3642514..3642856 | - | 343 | Protein_3480 | DEAD/DEAH box helicase | - |
| E1J56_RS17875 () | 3642963..3643526 | - | 564 | WP_130053454.1 | inovirus-type Gp2 protein | - |
| E1J56_RS17880 () | 3644414..3645847 | - | 1434 | WP_000335694.1 | DUF3987 domain-containing protein | - |
| E1J56_RS17885 () | 3646096..3646323 | - | 228 | WP_089069418.1 | DUF3987 domain-containing protein | - |
| E1J56_RS17890 () | 3646429..3646656 | - | 228 | WP_039022145.1 | AlpA family phage regulatory protein | - |
| E1J56_RS17895 () | 3647348..3648985 | + | 1638 | WP_039025855.1 | hypothetical protein | - |
| E1J56_RS17900 () | 3649072..3649668 | - | 597 | WP_047643993.1 | hypothetical protein | - |
| E1J56_RS17910 () | 3650169..3651422 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E1J56_RS17915 () | 3651434..3652537 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E1J56_RS17920 () | 3652825..3653880 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| E1J56_RS17925 () | 3653919..3654320 | - | 402 | WP_024228453.1 | sigma factor-binding protein Crl | - |
| E1J56_RS17930 () | 3654378..3655622 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3655038..3655118 | - | 81 | NuclAT_8 | - | - |
| - () | 3655038..3655118 | - | 81 | NuclAT_8 | - | - |
| - () | 3655038..3655118 | - | 81 | NuclAT_8 | - | - |
| - () | 3655038..3655118 | - | 81 | NuclAT_8 | - | - |
| E1J56_RS17935 () | 3655714..3656172 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E1J56_RS17940 () | 3656433..3657890 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| E1J56_RS17945 () | 3657947..3658468 | - | 522 | Protein_3494 | peptide chain release factor H | - |
| E1J56_RS17950 () | 3658467..3658670 | - | 204 | Protein_3495 | RNA ligase RtcB family protein | - |
| E1J56_RS17955 () | 3658916..3659326 | - | 411 | WP_169050818.1 | GNAT family N-acetyltransferase | - |
| E1J56_RS17960 () | 3659359..3660056 | + | 698 | Protein_3497 | IS1 family transposase | - |
| E1J56_RS17965 () | 3660062..3660145 | - | 84 | Protein_3498 | GNAT family N-acetyltransferase | - |
| E1J56_RS17970 () | 3660155..3660553 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E1J56_RS17975 () | 3660556..3660849 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E1J56_RS17980 () | 3660901..3661956 | - | 1056 | WP_001752094.1 | DNA polymerase IV | - |
| E1J56_RS17985 () | 3662027..3662950 | - | 924 | WP_001232547.1 | putative lateral flagellar export/assembly protein LafU | - |
| E1J56_RS17990 () | 3662953..3663816 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| E1J56_RS17995 () | 3663829..3664545 | - | 717 | WP_000938723.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| E1J56_RS18000 () | 3664565..3665032 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
| E1J56_RS18005 () | 3665040..3666101 | - | 1062 | WP_001752093.1 | flagellar hook-length control protein FliK | - |
| E1J56_RS18010 () | 3666098..3666409 | - | 312 | WP_000414993.1 | hypothetical protein | - |
| E1J56_RS18015 () | 3666414..3666806 | - | 393 | WP_136655470.1 | flagellar export chaperone FliS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|