MGE detailed information
MGE type: Prophage MGE length: 88371 bp
Accession: NZ_CP037910 Location: 2211415..2299785 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Accession: NZ_CP037910 Location: 2211415..2299785 Organism: Escherichia coli strain YSP8-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J56_RS10640 () | 2206910..2208298 | + | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| E1J56_RS10645 () | 2208323..2209357 | - | 1035 | WP_001118241.1 | AI-2 transporter TqsA | - |
| E1J56_RS25875 () | 2209561..2209662 | + | 102 | WP_211180498.1 | protein YdgV | - |
| E1J56_RS10655 () | 2209769..2210134 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| E1J56_RS10660 () | 2210121..2210450 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| E1J56_RS10665 () | 2210489..2211310 | - | 822 | WP_001260865.1 | serine protease | - |
| E1J56_RS10670 () | 2211415..2212112 | - | 698 | Protein_2079 | IS1 family transposase IS1G | Transposase |
| E1J56_RS10675 () | 2212187..2212270 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| E1J56_RS10680 () | 2212363..2212671 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| E1J56_RS25880 () | 2212927..2213046 | + | 120 | WP_001299090.1 | hypothetical protein | - |
| E1J56_RS10685 () | 2213095..2214348 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| E1J56_RS10690 () | 2214455..2215348 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| E1J56_RS10695 () | 2215483..2216703 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| E1J56_RS10700 () | 2216828..2217523 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| E1J56_RS10705 () | 2217476..2218768 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| E1J56_RS10710 () | 2218928..2219542 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| E1J56_RS10715 () | 2219585..2220439 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| E1J56_RS10720 () | 2220441..2221058 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| E1J56_RS10725 () | 2221069..2223492 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| E1J56_RS10730 () | 2223553..2225979 | - | 2427 | WP_001752532.1 | dimethyl sulfoxide reductase subunit A | - |
| E1J56_RS10735 () | 2226178..2226483 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| E1J56_RS10740 () | 2226591..2227301 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| E1J56_RS10745 () | 2227304..2227864 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| E1J56_RS10750 () | 2227899..2228240 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| E1J56_RS10755 () | 2228375..2228701 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| E1J56_RS10760 () | 2228907..2230121 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| E1J56_RS10765 () | 2230133..2231152 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| E1J56_RS10770 () | 2231283..2231980 | + | 698 | Protein_2100 | IS1 family transposase | - |
| E1J56_RS10775 () | 2231997..2232536 | - | 540 | Protein_2101 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS10780 () | 2232591..2233288 | + | 698 | Protein_2102 | IS1 family transposase IS1R | Transposase |
| E1J56_RS10785 () | 2233304..2233978 | - | 675 | Protein_2103 | hypothetical protein ; Integrase | Integrase |
| E1J56_RS10790 () | 2233998..2234249 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| E1J56_RS10795 () | 2234322..2236793 | - | 2472 | WP_053270473.1 | exonuclease | - |
| E1J56_RS10800 () | 2236887..2237078 | - | 192 | WP_001083270.1 | lysis protein YdfD | - |
| E1J56_RS10805 () | 2237075..2237263 | - | 189 | WP_000854560.1 | cell division inhibition protein DicB | - |
| E1J56_RS10810 () | 2237766..2237966 | + | 201 | WP_000159335.1 | hypothetical protein | - |
| E1J56_RS10815 () | 2237935..2238312 | - | 378 | WP_001241299.1 | hypothetical protein | - |
| E1J56_RS10820 () | 2238312..2238464 | - | 153 | WP_000379591.1 | DUF1391 family protein | - |
| E1J56_RS10825 () | 2238633..2239040 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| E1J56_RS10830 () | 2239121..2239348 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| E1J56_RS10835 () | 2239332..2239853 | + | 522 | WP_000705360.1 | hypothetical protein | - |
| E1J56_RS10840 () | 2239834..2240799 | + | 966 | WP_136655503.1 | hypothetical protein | - |
| E1J56_RS10845 () | 2240840..2241262 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| E1J56_RS10850 () | 2241259..2241615 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| E1J56_RS25735 () | 2242226..2242513 | + | 288 | Protein_2117 | hypothetical protein | - |
| E1J56_RS10865 () | 2243282..2244595 | + | 1314 | WP_021553632.1 | ISNCY family transposase ISCARN112 | Transposase |
| E1J56_RS10870 () | 2245032..2245364 | - | 333 | WP_001301033.1 | protein FlxA | - |
| E1J56_RS10875 () | 2245567..2245872 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| E1J56_RS10880 () | 2245897..2246136 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| E1J56_RS10885 () | 2246136..2246423 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| E1J56_RS10890 () | 2246495..2246650 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| E1J56_RS10895 () | 2246867..2247118 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| E1J56_RS10900 () | 2247185..2247463 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| E1J56_RS10905 () | 2247465..2248514 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| E1J56_RS10910 () | 2248528..2249280 | + | 753 | WP_001047135.1 | antitermination protein | - |
| E1J56_RS10915 () | 2249558..2249647 | - | 90 | WP_122985911.1 | hypothetical protein | - |
| E1J56_RS10920 () | 2249702..2249914 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| E1J56_RS10925 () | 2250213..2250428 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| E1J56_RS25885 () | 2250792..2250962 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| E1J56_RS10930 () | 2251181..2251396 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| E1J56_RS10935 () | 2251401..2251712 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| E1J56_RS10940 () | 2251709..2252242 | + | 534 | WP_001092971.1 | lysozyme | - |
| E1J56_RS10945 () | 2252239..2252736 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| E1J56_RS10950 () | 2253099..2253311 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| E1J56_RS10955 () | 2253322..2253510 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| E1J56_RS10960 () | 2253513..2253578 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| E1J56_RS10965 () | 2253658..2253813 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| E1J56_RS10970 () | 2253985..2254158 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| E1J56_RS10975 () | 2254310..2254720 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| E1J56_RS10980 () | 2254778..2255011 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| E1J56_RS10985 () | 2255400..2255945 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| E1J56_RS10990 () | 2255920..2257845 | + | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| E1J56_RS10995 () | 2257842..2258048 | + | 207 | WP_000198149.1 | gpW family protein | - |
| E1J56_RS11000 () | 2258045..2259646 | + | 1602 | WP_001356325.1 | phage portal protein | - |
| E1J56_RS11005 () | 2259627..2260946 | + | 1320 | WP_001723435.1 | S49 family peptidase | - |
| E1J56_RS11010 () | 2260956..2261288 | + | 333 | WP_001358225.1 | head decoration protein | - |
| E1J56_RS11015 () | 2261344..2262369 | + | 1026 | WP_072657557.1 | major capsid protein | - |
| E1J56_RS11020 () | 2262411..2262806 | + | 396 | WP_052936358.1 | DNA-packaging protein FI | - |
| E1J56_RS11025 () | 2262818..2263171 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| E1J56_RS11030 () | 2263183..2263760 | + | 578 | Protein_2152 | phage tail protein | - |
| E1J56_RS11035 () | 2263757..2264152 | + | 396 | WP_001535869.1 | phage minor tail U family protein | - |
| E1J56_RS11040 () | 2264160..2264900 | + | 741 | WP_001619477.1 | phage tail protein | - |
| E1J56_RS11045 () | 2264916..2265338 | + | 423 | WP_000479151.1 | phage minor tail protein G | - |
| E1J56_RS11050 () | 2265320..2265754 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| E1J56_RS11055 () | 2265747..2268326 | + | 2580 | WP_053270648.1 | phage tail tape measure protein | - |
| E1J56_RS11060 () | 2268323..2268652 | + | 330 | WP_000847331.1 | phage tail protein | - |
| E1J56_RS11065 () | 2268652..2269350 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| E1J56_RS11070 () | 2269356..2270099 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| E1J56_RS11075 () | 2270036..2270668 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| E1J56_RS11080 () | 2270729..2274127 | + | 3399 | WP_063101755.1 | host specificity protein J | - |
| E1J56_RS11085 () | 2274194..2274793 | + | 600 | WP_001230352.1 | hypothetical protein | VF |
| E1J56_RS11090 () | 2274858..2278202 | + | 3345 | WP_136655422.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E1J56_RS11095 () | 2278202..2278777 | + | 576 | WP_053270556.1 | tail fiber assembly protein | - |
| E1J56_RS11100 () | 2278875..2279465 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| E1J56_RS11105 () | 2279782..2280015 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| E1J56_RS11110 () | 2280084..2280197 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| E1J56_RS11115 () | 2280801..2282084 | + | 1284 | Protein_2169 | MHS family MFS transporter YdfJ | - |
| E1J56_RS11120 () | 2282173..2283633 | + | 1461 | WP_001752530.1 | mannitol dehydrogenase family protein | - |
| E1J56_RS11125 () | 2283669..2283872 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E1J56_RS11130 () | 2284050..2284736 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| E1J56_RS11135 () | 2284825..2285571 | - | 747 | WP_000636570.1 | hypothetical protein | VF |
| E1J56_RS11140 () | 2285708..2287753 | + | 2046 | WP_053270555.1 | peptidyl-dipeptidase Dcp | - |
| E1J56_RS11145 () | 2287798..2288316 | - | 519 | WP_001024808.1 | 2-oxo-tetronate isomerase | - |
| E1J56_RS11150 () | 2288391..2289088 | + | 698 | Protein_2176 | IS1 family transposase | - |
| E1J56_RS11155 () | 2289368..2289760 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| E1J56_RS11160 () | 2290015..2290905 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| E1J56_RS25890 () | 2291020..2291124 | - | 105 | WP_211180496.1 | protein MgtT | - |
| E1J56_RS11165 () | 2291124..2291219 | - | 96 | WP_000901367.1 | protein MgtS | - |
| E1J56_RS11170 () | 2291346..2292533 | - | 1188 | WP_001054196.1 | efflux MFS transporter YdeE | - |
| E1J56_RS11175 () | 2292728..2293627 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| E1J56_RS11180 () | 2293658..2293876 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| E1J56_RS11185 () | 2293908..2294291 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| E1J56_RS11190 () | 2294312..2294746 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| E1J56_RS11195 () | 2294966..2295286 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E1J56_RS11200 () | 2295276..2295560 | + | 285 | WP_000268704.1 | helix-turn-helix domain-containing protein | - |
| E1J56_RS11205 () | 2295681..2296346 | + | 666 | WP_032197896.1 | NAAT family transporter MarC | - |
| E1J56_RS11210 () | 2296371..2297561 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| E1J56_RS11215 () | 2297711..2298826 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| E1J56_RS11220 () | 2298904..2299785 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| E1J56_RS11225 () | 2299886..2301274 | + | 1389 | WP_053270554.1 | succinate-semialdehyde dehydrogenase | - |
| E1J56_RS11230 () | 2301338..2302264 | + | 927 | WP_000257409.1 | glutaminase B | - |
| E1J56_RS11235 () | 2302264..2302623 | + | 360 | WP_001191019.1 | DUF4186 domain-containing protein | - |
| E1J56_RS11240 () | 2302696..2303682 | + | 987 | Protein_2195 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|