MGE detailed information
MGE type: Mobilizable plasmid MGE length: 28519 bp
Accession: NZ_CP037908 Location: 1..28519 Organism: Escherichia coli strain LHM10-1 Replicon: plasmid unnamed4
Accession: NZ_CP037908 Location: 1..28519 Organism: Escherichia coli strain LHM10-1 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1J55_RS24980 () | 674..1378 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| E1J55_RS24985 () | 1659..1943 | + | 285 | WP_024227107.1 | hypothetical protein | - |
| E1J55_RS24990 () | 1977..2276 | - | 300 | WP_112920252.1 | XRE family transcriptional regulator | Antitoxin Detail |
| E1J55_RS24995 () | 2276..2623 | - | 348 | WP_025667955.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E1J55_RS25000 () | 2988..3635 | + | 648 | WP_001615566.1 | ParA family protein | - |
| E1J55_RS25005 () | 3675..3908 | + | 234 | WP_001615564.1 | hypothetical protein | - |
| E1J55_RS25010 () | 3947..4483 | - | 537 | WP_112920253.1 | hypothetical protein | - |
| E1J55_RS25015 () | 4493..4957 | - | 465 | WP_112920254.1 | thermonuclease family protein | - |
| E1J55_RS25020 () | 4961..5695 | - | 735 | WP_112920255.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| E1J55_RS25025 () | 5707..7434 | - | 1728 | WP_001350940.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E1J55_RS25045 () | 8244..8549 | - | 306 | WP_112920237.1 | dpoa decarboxylase | - |
| E1J55_RS25050 () | 8577..8792 | - | 216 | WP_112920238.1 | hypothetical protein | - |
| E1J55_RS25055 () | 8795..9094 | - | 300 | WP_112920239.1 | conjugal transfer protein | - |
| E1J55_RS25060 () | 9124..9522 | - | 399 | WP_112920240.1 | cag pathogenicity island Cag12 family protein | - |
| E1J55_RS25065 () | 9519..10544 | - | 1026 | WP_112920241.1 | Type IV secretion system protein VirB11 | VF |
| E1J55_RS25070 () | 10534..10724 | - | 191 | Protein_16 | hypothetical protein | - |
| E1J55_RS25075 () | 10708..11973 | - | 1266 | WP_112920242.1 | Type IV secretion system protein virB10 | VF |
| E1J55_RS25080 () | 12015..12920 | - | 906 | WP_112920243.1 | P-type conjugative transfer protein VirB9 | - |
| E1J55_RS25085 () | 12920..13603 | - | 684 | WP_000139289.1 | Type IV secretion system protein PtlE | VF |
| E1J55_RS25500 () | 13596..13739 | - | 144 | WP_029397043.1 | hypothetical protein | - |
| E1J55_RS25090 () | 13789..14859 | - | 1071 | WP_029397044.1 | type IV secretion system protein | - |
| E1J55_RS25095 () | 14868..15095 | - | 228 | WP_029397045.1 | EexN family lipoprotein | - |
| E1J55_RS25100 () | 15105..15812 | - | 708 | WP_001615551.1 | type IV secretion system protein | - |
| E1J55_RS25105 () | 15827..18571 | - | 2745 | WP_112920244.1 | Type IV secretion system protein virB4 | VF |
| E1J55_RS25110 () | 18584..18880 | - | 297 | WP_001615548.1 | Type IV secretion system protein virB2 | VF |
| E1J55_RS25115 () | 18884..19588 | - | 705 | WP_094283541.1 | Type IV secretion system protein virB1 | VF |
| E1J55_RS25120 () | 19604..19810 | - | 207 | WP_112920245.1 | hypothetical protein | - |
| E1J55_RS25125 () | 19811..20023 | - | 213 | WP_001133545.1 | hypothetical protein | - |
| E1J55_RS25130 () | 20100..20579 | - | 480 | WP_001615545.1 | hypothetical protein | - |
| E1J55_RS25135 () | 20802..21170 | + | 369 | WP_107131128.1 | helix-turn-helix domain-containing protein | - |
| E1J55_RS25140 () | 21737..22462 | + | 726 | WP_001312457.1 | RepA protein | - |
| E1J55_RS25145 () | 23535..24232 | + | 698 | Protein_32 | IS1-like element IS1A family transposase | - |
| E1J55_RS25150 () | 24229..24468 | + | 240 | WP_136698677.1 | hypothetical protein | - |
| E1J55_RS25155 () | 24542..24841 | + | 300 | WP_112920247.1 | hypothetical protein | - |
| E1J55_RS25160 () | 25212..25745 | + | 534 | WP_112920248.1 | J domain-containing protein | - |
| E1J55_RS25165 () | 25873..26415 | + | 543 | WP_112920249.1 | hypothetical protein | - |
| E1J55_RS25170 () | 26440..26709 | + | 270 | WP_112920250.1 | hypothetical protein | - |
| E1J55_RS25175 () | 26699..26938 | + | 240 | WP_112920251.1 | hypothetical protein | - |
| E1J55_RS25185 () | 27171..27875 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|