MGE detailed information
MGE type: Prophage MGE length: 97965 bp
Accession: NZ_CP037449 Location: 4121656..4219620 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP037449 Location: 4121656..4219620 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0708_RS19330 () | 4119130..4120203 | - | 1074 | WP_000810242.1 | acyltransferase family protein | - |
| E0708_RS19335 () | 4120464..4121663 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| E0708_RS19340 () | 4121656..4122357 | + | 702 | WP_001033695.1 | hypothetical protein | VF |
| E0708_RS19345 () | 4122357..4123601 | + | 1245 | WP_001251365.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| E0708_RS19350 () | 4123630..4124541 | + | 912 | WP_000291305.1 | N-acetylglucosamine kinase | - |
| E0708_RS19355 () | 4124557..4125377 | + | 821 | Protein_3770 | NAD-dependent protein deacylase | - |
| E0708_RS19360 () | 4125515..4126302 | - | 788 | Protein_3771 | TPM domain-containing protein | - |
| E0708_RS19365 () | 4126299..4126760 | - | 462 | WP_001443234.1 | DUF3592 domain-containing protein | - |
| E0708_RS19370 () | 4126818..4127864 | - | 1047 | WP_000759310.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| E0708_RS19375 () | 4127861..4128655 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| E0708_RS19380 () | 4128822..4129939 | - | 1118 | Protein_3775 | hypothetical protein ; Integrase | Integrase |
| E0708_RS19385 () | 4129908..4130176 | - | 269 | Protein_3776 | excisionase | - |
| E0708_RS19390 () | 4130238..4132676 | - | 2439 | WP_000102132.1 | exonuclease | - |
| E0708_RS19395 () | 4132769..4132957 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| E0708_RS19400 () | 4132954..4133142 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| E0708_RS19405 () | 4133646..4133912 | + | 267 | WP_012601410.1 | hypothetical protein | - |
| E0708_RS19410 () | 4133901..4134239 | - | 339 | WP_000394541.1 | hypothetical protein | - |
| E0708_RS19415 () | 4134251..4134403 | - | 153 | WP_000380313.1 | DUF1391 family protein | - |
| E0708_RS19420 () | 4134695..4134973 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E0708_RS19425 () | 4134975..4135166 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| E0708_RS19430 () | 4135187..4135558 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| E0708_RS19435 () | 4135656..4135958 | + | 303 | WP_001556930.1 | transcriptional regulator | - |
| E0708_RS19440 () | 4135955..4136380 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| E0708_RS19445 () | 4136403..4137365 | + | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| E0708_RS19450 () | 4137372..4138118 | + | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| E0708_RS19455 () | 4138140..4138910 | + | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| E0708_RS19460 () | 4138926..4139348 | + | 423 | Protein_3791 | DUF977 family protein | - |
| E0708_RS19465 () | 4139454..4139666 | + | 213 | WP_000072553.1 | hypothetical protein | - |
| E0708_RS19470 () | 4139699..4139917 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| E0708_RS19475 () | 4139919..4140182 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| E0708_RS19480 () | 4140193..4140336 | + | 144 | WP_000207966.1 | hypothetical protein | - |
| E0708_RS19485 () | 4140314..4140670 | + | 357 | WP_000403778.1 | hypothetical protein | - |
| E0708_RS19490 () | 4140764..4140946 | + | 183 | WP_001224662.1 | hypothetical protein | - |
| E0708_RS19495 () | 4140939..4141115 | + | 177 | WP_000753058.1 | hypothetical protein | - |
| E0708_RS19500 () | 4141112..4141626 | + | 515 | Protein_3799 | hypothetical protein | - |
| E0708_RS19505 () | 4142185..4142340 | + | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| E0708_RS19510 () | 4142507..4142785 | + | 279 | WP_032141837.1 | hypothetical protein | - |
| E0708_RS19515 () | 4142787..4143836 | + | 1050 | WP_001265310.1 | DUF968 domain-containing protein | - |
| E0708_RS19520 () | 4143849..4144208 | + | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E0708_RS19525 () | 4144217..4144771 | + | 555 | WP_000640021.1 | DUF1133 family protein | - |
| E0708_RS19530 () | 4144996..4145193 | + | 198 | WP_000917765.1 | hypothetical protein | - |
| E0708_RS19535 () | 4145169..4145282 | + | 114 | WP_157835956.1 | DUF3927 family protein | - |
| E0708_RS19540 () | 4145578..4145913 | - | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| E0708_RS19545 () | 4146174..4148136 | + | 1963 | Protein_3808 | DUF1737 domain-containing protein | - |
| E0708_RS19550 () | 4148273..4148455 | + | 183 | WP_001304601.1 | DUF1378 family protein | - |
| E0708_RS19555 () | 4148493..4148738 | + | 246 | WP_001556910.1 | DUF826 domain-containing protein | - |
| E0708_RS19560 () | 4148815..4149030 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| E0708_RS19565 () | 4149035..4149925 | + | 891 | WP_001037012.1 | YdfR family protein | - |
| E0708_RS19570 () | 4149962..4150495 | + | 534 | WP_001092866.1 | lysozyme | - |
| E0708_RS19575 () | 4150652..4150834 | + | 183 | WP_001446668.1 | hypothetical protein | - |
| E0708_RS19580 () | 4150849..4150980 | + | 132 | WP_001280932.1 | hypothetical protein | - |
| E0708_RS19585 () | 4150983..4151450 | + | 468 | WP_032142285.1 | lysis protein | - |
| E0708_RS19590 () | 4151761..4152087 | + | 327 | WP_000830178.1 | TonB family protein | - |
| E0708_RS19595 () | 4152210..4152563 | - | 354 | WP_001322427.1 | hypothetical protein | - |
| E0708_RS19600 () | 4153046..4153555 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| E0708_RS19605 () | 4153527..4155455 | + | 1929 | WP_001309424.1 | phage terminase large subunit family protein | - |
| E0708_RS19610 () | 4155439..4155645 | + | 207 | WP_000258993.1 | head-tail joining protein | - |
| E0708_RS19615 () | 4155642..4157234 | + | 1593 | WP_001322425.1 | phage portal protein | - |
| E0708_RS19620 () | 4157224..4158729 | + | 1506 | WP_169710471.1 | S49 family peptidase | - |
| E0708_RS19625 () | 4158766..4159113 | + | 348 | WP_000256840.1 | head decoration protein | - |
| E0708_RS19630 () | 4159171..4160199 | + | 1029 | WP_049030783.1 | major capsid protein | - |
| E0708_RS19635 () | 4160251..4160625 | + | 375 | WP_000201530.1 | hypothetical protein | - |
| E0708_RS19640 () | 4160618..4160971 | + | 354 | WP_001204533.1 | tail attachment protein | - |
| E0708_RS19645 () | 4160987..4161520 | + | 534 | WP_000974996.1 | phage tail protein | - |
| E0708_RS19650 () | 4161517..4161912 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| E0708_RS19655 () | 4161920..4162669 | + | 750 | WP_000235047.1 | phage tail protein | - |
| E0708_RS19660 () | 4162688..4163119 | + | 432 | WP_001309426.1 | phage minor tail protein G | - |
| E0708_RS19665 () | 4163146..4163559 | + | 414 | WP_000533453.1 | phage tail assembly protein T | - |
| E0708_RS19670 () | 4163540..4166101 | + | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| E0708_RS19675 () | 4166098..4166427 | + | 330 | WP_000847298.1 | phage tail protein | - |
| E0708_RS19680 () | 4166427..4167125 | + | 699 | WP_001348269.1 | phage minor tail protein L | - |
| E0708_RS19685 () | 4167136..4167879 | + | 744 | WP_000194711.1 | C40 family peptidase | - |
| E0708_RS19690 () | 4167825..4168457 | + | 633 | WP_072037205.1 | tail assembly protein | - |
| E0708_RS19695 () | 4168801..4172493 | + | 3693 | WP_016265923.1 | DUF1983 domain-containing protein | - |
| E0708_RS19700 () | 4172561..4173160 | + | 600 | WP_001233154.1 | hypothetical protein | VF |
| E0708_RS19705 () | 4173312..4176338 | + | 3027 | WP_000216487.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E0708_RS19710 () | 4176338..4176922 | + | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| E0708_RS19715 () | 4176977..4177645 | - | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| E0708_RS19720 () | 4177702..4177968 | + | 267 | WP_000937481.1 | tail fiber assembly protein | - |
| E0708_RS19725 () | 4178200..4179063 | - | 864 | WP_000799413.1 | spermidine/putrescine ABC transporter permease PotB | - |
| E0708_RS19730 () | 4179047..4180183 | - | 1137 | WP_000531594.1 | hypothetical protein | VF |
| E0708_RS19735 () | 4180433..4181659 | + | 1227 | WP_000359446.1 | peptidase T | - |
| E0708_RS19740 () | 4181708..4182829 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| E0708_RS19745 () | 4182905..4184365 | - | 1461 | WP_000734671.1 | two-component system sensor histidine kinase PhoQ | - |
| E0708_RS19750 () | 4184365..4185036 | - | 672 | WP_001265481.1 | hypothetical protein | VF |
| E0708_RS19755 () | 4185206..4186576 | - | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| E0708_RS19760 () | 4186580..4187221 | - | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| E0708_RS19765 () | 4187257..4188363 | - | 1107 | WP_001443105.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| E0708_RS19770 () | 4188417..4188878 | - | 462 | WP_000476093.1 | phosphatase NudJ | - |
| E0708_RS19775 () | 4188888..4189541 | - | 654 | WP_001248695.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| E0708_RS19780 () | 4189713..4190963 | + | 1251 | WP_000444492.1 | NADP-dependent isocitrate dehydrogenase | - |
| E0708_RS19785 () | 4191047..4191172 | - | 126 | WP_001445545.1 | hypothetical protein | - |
| E0708_RS19790 () | 4191225..4191629 | - | 405 | WP_000373104.1 | DUF1398 domain-containing protein | - |
| E0708_RS19795 () | 4191850..4192581 | - | 732 | WP_000332313.1 | IS607 family transposase ISAfe11 | Transposase |
| E0708_RS19800 () | 4192786..4193904 | - | 1119 | WP_058589945.1 | blue light-responsive regulator BluF | - |
| E0708_RS19805 () | 4194310..4194546 | + | 237 | WP_000554153.1 | two-component-system connector protein YcgZ | - |
| E0708_RS19810 () | 4194589..4194861 | + | 273 | WP_000858013.1 | hypothetical protein | - |
| E0708_RS19815 () | 4194890..4195156 | + | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| E0708_RS19820 () | 4195269..4195517 | + | 249 | WP_001065750.1 | hypothetical protein | - |
| E0708_RS19825 () | 4195815..4196708 | + | 894 | Protein_3864 | hypothetical protein | VF |
| E0708_RS19830 () | 4196840..4197058 | + | 219 | WP_001065862.1 | hypothetical protein | - |
| E0708_RS19835 () | 4197456..4197635 | + | 180 | WP_001304450.1 | hypothetical protein | - |
| E0708_RS19840 () | 4197862..4198974 | + | 1113 | Protein_3867 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| E0708_RS19845 () | 4199032..4199367 | - | 336 | WP_000979977.1 | YmgD family protein | - |
| E0708_RS19850 () | 4199371..4199715 | - | 345 | WP_000726974.1 | glycine zipper family protein | - |
| E0708_RS19855 () | 4199717..4199890 | - | 174 | WP_000120038.1 | hypothetical protein | - |
| E0708_RS19860 () | 4199991..4200176 | + | 186 | WP_001336711.1 | hypothetical protein | - |
| E0708_RS19865 () | 4200137..4200256 | + | 120 | WP_001131456.1 | hypothetical protein | - |
| E0708_RS19870 () | 4200291..4200634 | + | 344 | Protein_3873 | hypothetical protein | VF |
| E0708_RS19875 () | 4201007..4201273 | - | 267 | WP_001185665.1 | cell division topological specificity factor MinE | - |
| E0708_RS19880 () | 4201277..4202089 | - | 813 | WP_000101055.1 | hypothetical protein | VF |
| E0708_RS19885 () | 4202113..4202808 | - | 696 | WP_000072533.1 | septum site-determining protein MinC | - |
| E0708_RS19890 () | 4203328..4203696 | + | 369 | WP_001056851.1 | hypothetical protein | - |
| E0708_RS19895 () | 4203816..4204217 | - | 402 | WP_000693755.1 | PPC domain-containing protein | - |
| E0708_RS19900 () | 4204459..4204752 | + | 294 | WP_001295992.1 | YcgL domain-containing protein | - |
| E0708_RS19905 () | 4204824..4205483 | + | 660 | WP_000284277.1 | fumarylacetoacetate hydrolase family protein | - |
| E0708_RS19910 () | 4205575..4206021 | + | 447 | WP_001339583.1 | YcgN family cysteine cluster protein | - |
| E0708_RS19915 () | 4206228..4206617 | - | 390 | WP_085960557.1 | hemolysin E | - |
| E0708_RS19920 () | 4206814..4207233 | + | 420 | WP_000897380.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E0708_RS19925 () | 4207233..4208501 | + | 1269 | WP_000457597.1 | DNA polymerase V catalytic protein | - |
| E0708_RS19930 () | 4208546..4209076 | - | 531 | WP_000943452.1 | disulfide bond formation protein DsbB | - |
| E0708_RS19935 () | 4209222..4210763 | - | 1542 | WP_000406402.1 | Na(+)/H(+) antiporter NhaB | - |
| E0708_RS19940 () | 4210985..4211704 | + | 720 | WP_000234823.1 | fatty acid metabolism transcriptional regulator FadR | - |
| E0708_RS19945 () | 4211867..4213399 | - | 1533 | WP_000190855.1 | SpoVR family protein | - |
| E0708_RS19950 () | 4213729..4215027 | + | 1299 | WP_001266908.1 | D-amino acid dehydrogenase | - |
| E0708_RS19955 () | 4215037..4216107 | + | 1071 | WP_000197877.1 | catabolic alanine racemase DadX | - |
| E0708_RS19960 () | 4216164..4217900 | - | 1737 | WP_000340206.1 | potassium/proton antiporter | - |
| E0708_RS19965 () | 4217995..4218909 | - | 915 | WP_000051575.1 | muramoyltetrapeptide carboxypeptidase | - |
| E0708_RS19970 () | 4219009..4219620 | + | 612 | WP_001295994.1 | membrane-bound lytic murein transglycosylase EmtA | - |
| E0708_RS19975 () | 4219622..4220356 | - | 735 | WP_000020177.1 | flagellar brake protein | - |
| E0708_RS19980 () | 4220557..4220811 | + | 255 | WP_000511315.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| E0708_RS19985 () | 4220861..4222831 | - | 1971 | WP_001304440.1 | TonB-dependent receptor | - |
| E0708_RS19990 () | 4222857..4223711 | - | 855 | WP_000576827.1 | ModD protein | - |
| E0708_RS19995 () | 4223708..4224520 | - | 813 | WP_000904011.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|