MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 135415 bp
Accession: NZ_CP036255 Location: 4553869..4689283 Organism: Xanthomonas oryzae strain BB151-3 Replicon: chromosome
Accession: NZ_CP036255 Location: 4553869..4689283 Organism: Xanthomonas oryzae strain BB151-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EYC56_RS21420 () | 4551079..4552824 | - | 1746 | WP_131085540.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| EYC56_RS21425 () | 4553033..4553291 | - | 259 | Protein_3875 | transposase | - |
| EYC56_RS21430 () | 4553836..4554048 | + | 213 | WP_087785779.1 | hypothetical protein | - |
| EYC56_RS21435 () | 4554068..4554460 | + | 393 | WP_087785776.1 | hypothetical protein | - |
| EYC56_RS21440 () | 4554746..4555522 | + | 777 | WP_131085542.1 | GTPase | - |
| EYC56_RS21445 () | 4555578..4555944 | + | 367 | Protein_3879 | DUF3085 domain-containing protein | - |
| EYC56_RS21450 () | 4556309..4557223 | + | 915 | WP_087785770.1 | DUF3577 domain-containing protein | - |
| EYC56_RS21455 () | 4557283..4557981 | + | 699 | WP_087785767.1 | DUF3275 family protein | - |
| EYC56_RS21460 () | 4558074..4558418 | + | 345 | WP_087785782.1 | hypothetical protein | - |
| EYC56_RS21465 () | 4558524..4558931 | + | 408 | WP_087785765.1 | hypothetical protein | - |
| EYC56_RS21470 () | 4558946..4559206 | + | 261 | WP_087785763.1 | hypothetical protein | - |
| EYC56_RS21475 () | 4559284..4559937 | + | 654 | WP_087785760.1 | hypothetical protein | - |
| EYC56_RS21480 () | 4560007..4561116 | + | 1110 | WP_131083001.1 | class I SAM-dependent methyltransferase | - |
| EYC56_RS21485 () | 4561286..4563562 | + | 2277 | WP_087785754.1 | DEAD/DEAH box helicase | - |
| EYC56_RS21490 () | 4563778..4563915 | + | 138 | Protein_3888 | IS481 family transposase ISAeme21 | Transposase |
| EYC56_RS21495 () | 4564001..4564951 | + | 951 | WP_131085544.1 | IS481 family transposase ISAeme21 | Transposase |
| EYC56_RS21500 () | 4565060..4566607 | + | 1548 | WP_131086101.1 | MASE1 domain-containing protein | - |
| EYC56_RS21505 () | 4566557..4566985 | - | 429 | WP_131085546.1 | hypothetical protein | - |
| EYC56_RS21510 () | 4567429..4567959 | + | 531 | WP_131086102.1 | hypothetical protein | VF |
| EYC56_RS21515 () | 4567989..4568603 | + | 615 | WP_087785726.1 | hypothetical protein | - |
| EYC56_RS21520 () | 4568610..4569368 | + | 759 | WP_131082996.1 | TIGR03759 family integrating conjugative element protein | - |
| EYC56_RS21525 () | 4569353..4569955 | + | 603 | WP_087785732.1 | transglycosylase SLT domain-containing protein | - |
| EYC56_RS21530 () | 4569952..4570539 | + | 588 | WP_087785735.1 | integrating conjugative element protein | - |
| EYC56_RS21535 () | 4570541..4572712 | + | 2172 | WP_087785737.1 | type IV conjugative transfer system coupling protein TraD | - |
| EYC56_RS21540 () | 4572709..4573458 | + | 750 | WP_087785739.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| EYC56_RS21545 () | 4573562..4574747 | - | 1186 | Protein_3899 | IS3 family transposase ISXac3 | Transposase |
| EYC56_RS21555 () | 4574911..4577202 | + | 2292 | WP_131085550.1 | CRISPR-associated helicase Cas3' | - |
| EYC56_RS21560 () | 4577618..4578292 | + | 675 | WP_131082937.1 | type I-C CRISPR-associated protein Cas5 | - |
| EYC56_RS21565 () | 4578289..4580130 | + | 1842 | WP_131082938.1 | type I-C CRISPR-associated protein Cas8c/Csd1 | - |
| EYC56_RS21570 () | 4580127..4580993 | + | 867 | WP_131082939.1 | type I-C CRISPR-associated protein Cas7/Csd2 | - |
| EYC56_RS21575 () | 4581013..4581645 | + | 633 | WP_011257743.1 | CRISPR-associated protein Cas4 | - |
| EYC56_RS21580 () | 4581648..4582682 | + | 1035 | WP_087785567.1 | type I-C CRISPR-associated endonuclease Cas1 | - |
| EYC56_RS21585 () | 4582697..4582987 | + | 291 | WP_087785570.1 | CRISPR-associated endonuclease Cas2 | - |
| EYC56_RS21590 () | 4587246..4588214 | + | 969 | WP_131085553.1 | IS5 family transposase ISXo1 | Transposase |
| EYC56_RS21595 () | 4588879..4589642 | - | 764 | Protein_3908 | IS5 family transposase ISCARN33 | Transposase |
| EYC56_RS21600 () | 4589675..4590103 | - | 429 | Protein_3909 | hypothetical protein | - |
| EYC56_RS21605 () | 4590271..4591239 | + | 969 | WP_131085557.1 | IS481 family transposase ISAeme21 | Transposase |
| EYC56_RS21610 () | 4591217..4591865 | - | 649 | Protein_3911 | transposase | - |
| EYC56_RS21615 () | 4592224..4592619 | + | 396 | WP_131082941.1 | hypothetical protein | - |
| EYC56_RS21620 () | 4592616..4592855 | + | 240 | WP_087785478.1 | TIGR03758 family integrating conjugative element protein | - |
| EYC56_RS21625 () | 4592875..4593243 | + | 369 | WP_087785482.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| EYC56_RS21630 () | 4593255..4593680 | + | 426 | WP_131082942.1 | TIGR03750 family conjugal transfer protein | - |
| EYC56_RS21635 () | 4593677..4594372 | + | 696 | WP_131082943.1 | TIGR03746 family integrating conjugative element protein | - |
| EYC56_RS21640 () | 4594369..4595325 | + | 957 | WP_131082944.1 | TIGR03749 family integrating conjugative element protein | - |
| EYC56_RS21645 () | 4595315..4596772 | + | 1458 | WP_131082945.1 | TIGR03752 family integrating conjugative element protein | - |
| EYC56_RS21650 () | 4596777..4597214 | + | 438 | WP_087785496.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| EYC56_RS21655 () | 4597214..4600159 | + | 2946 | WP_087785499.1 | conjugative transfer ATPase | - |
| EYC56_RS21660 () | 4600174..4600896 | + | 723 | WP_131082946.1 | thioredoxin domain-containing protein | - |
| EYC56_RS21665 () | 4601246..4601746 | + | 501 | WP_087785502.1 | DNA repair protein RadC | - |
| EYC56_RS21670 () | 4601872..4602309 | + | 438 | WP_131082947.1 | TIGR03757 family integrating conjugative element protein | - |
| EYC56_RS21675 () | 4602306..4603244 | + | 939 | WP_087785508.1 | TIGR03756 family integrating conjugative element protein | - |
| EYC56_RS21680 () | 4603255..4604655 | + | 1401 | WP_087785511.1 | integrating conjugative element protein | - |
| EYC56_RS21685 () | 4604652..4605614 | + | 963 | WP_131082948.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| EYC56_RS21690 () | 4606063..4607328 | - | 1266 | WP_131082949.1 | Prophage integrase IntA ; Integrase | Integrase |
| EYC56_RS21695 () | 4607521..4608303 | - | 783 | WP_131086103.1 | SIMPL domain-containing protein | - |
| EYC56_RS21700 () | 4608306..4609394 | - | 1089 | WP_131085560.1 | threonine aldolase | - |
| EYC56_RS21705 () | 4609394..4610869 | - | 1476 | WP_024742942.1 | anthranilate synthase component I | - |
| EYC56_RS21710 () | 4611471..4612400 | - | 930 | WP_131075850.1 | lipid kinase YegS | - |
| EYC56_RS21715 () | 4612635..4613126 | - | 492 | WP_024711904.1 | GNAT family N-acetyltransferase | - |
| EYC56_RS21720 () | 4613123..4613824 | - | 702 | WP_024711903.1 | Ribulose-phosphate 3-epimerase | VF |
| EYC56_RS21725 () | 4614203..4614532 | - | 330 | WP_024711902.1 | DnaJ domain-containing protein | - |
| EYC56_RS21730 () | 4614741..4615666 | + | 926 | Protein_3935 | Phosphoribosylaminoimidazole-succinocarboxamide synthase | VF |
| EYC56_RS21735 () | 4616139..4616816 | + | 678 | Protein_3936 | NYN domain-containing protein | - |
| EYC56_RS21740 () | 4616777..4617211 | + | 435 | WP_131077741.1 | lytic enzyme | - |
| EYC56_RS21745 () | 4617640..4619235 | + | 1596 | WP_131085563.1 | Transglutaminase-activating metalloprotease | VF |
| EYC56_RS21750 () | 4619335..4619820 | + | 486 | WP_131075854.1 | DUF962 domain-containing protein | - |
| EYC56_RS21755 () | 4619846..4620235 | - | 390 | Protein_3940 | SDR family oxidoreductase | - |
| EYC56_RS21760 () | 4620366..4623194 | + | 2829 | WP_131085565.1 | monovalent cation/H+ antiporter subunit A | - |
| EYC56_RS21765 () | 4623194..4623568 | + | 375 | WP_024712495.1 | Na+/H+ antiporter subunit C | - |
| EYC56_RS21770 () | 4623565..4625109 | + | 1545 | WP_053501666.1 | monovalent cation/H+ antiporter subunit D | - |
| EYC56_RS21775 () | 4625106..4625612 | + | 507 | WP_024745838.1 | Na+/H+ antiporter subunit E | - |
| EYC56_RS21780 () | 4625609..4625893 | + | 285 | WP_011260421.1 | K+/H+ antiporter subunit F | - |
| EYC56_RS21785 () | 4625890..4626243 | + | 354 | WP_011260422.1 | Na+/H+ antiporter subunit G | - |
| EYC56_RS21790 () | 4626640..4627029 | + | 390 | WP_131086104.1 | hypothetical protein | - |
| EYC56_RS21795 () | 4627453..4628778 | - | 1326 | WP_131085567.1 | homogentisate 1,2-dioxygenase | - |
| EYC56_RS21800 () | 4629143..4630258 | - | 1116 | WP_165480611.1 | 4-hydroxyphenylpyruvate dioxygenase | - |
| EYC56_RS21805 () | 4630382..4630870 | + | 489 | WP_019301451.1 | MarR family transcriptional regulator | - |
| EYC56_RS21810 () | 4631227..4631817 | - | 591 | WP_053501669.1 | thioredoxin family protein | - |
| EYC56_RS21815 () | 4631829..4633337 | - | 1509 | WP_053501670.1 | oligopeptide:H+ symporter | - |
| EYC56_RS21820 () | 4633781..4634674 | - | 894 | WP_131082957.1 | tryptophan 2,3-dioxygenase | - |
| EYC56_RS21825 () | 4635087..4636616 | + | 1530 | WP_131085569.1 | lamin tail domain-containing protein | - |
| EYC56_RS21830 () | 4636794..4637882 | + | 1089 | WP_053502075.1 | pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha | - |
| EYC56_RS21835 () | 4637875..4638945 | + | 1071 | WP_053502076.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| EYC56_RS21840 () | 4638947..4639330 | + | 384 | WP_131075864.1 | peptide-binding protein | - |
| EYC56_RS21845 () | 4639327..4640844 | + | 1518 | WP_131082960.1 | 2-oxo acid dehydrogenase subunit E2 | - |
| EYC56_RS24690 () | 4640769..4641140 | - | 372 | WP_165480806.1 | hypothetical protein | - |
| EYC56_RS21855 () | 4641187..4642203 | - | 1017 | WP_131086105.1 | IS30 family transposase IS1382 | Transposase |
| EYC56_RS21860 () | 4642256..4642483 | - | 228 | Protein_3961 | type III effector protein XopW | - |
| EYC56_RS21870 () | 4644192..4645250 | - | 1059 | WP_207306617.1 | IS630 family transposase ISAzo30 | Transposase |
| EYC56_RS21875 () | 4645371..4645607 | + | 237 | Protein_3964 | hypothetical protein | - |
| EYC56_RS21885 () | 4645870..4647855 | - | 1986 | WP_131085575.1 | beta-N-acetylglucosaminidase domain-containing protein | - |
| EYC56_RS21895 () | 4648468..4648806 | - | 339 | WP_053501974.1 | P-II family nitrogen regulator | - |
| EYC56_RS21900 () | 4648996..4649274 | + | 279 | WP_014504991.1 | accessory factor UbiK family protein | - |
| EYC56_RS21905 () | 4649291..4650811 | + | 1521 | WP_053501954.1 | YifB family Mg chelatase-like AAA ATPase | - |
| EYC56_RS21915 () | 4651286..4651795 | + | 510 | WP_053503669.1 | lipocalin family protein | - |
| EYC56_RS21920 () | 4651948..4652124 | - | 177 | WP_053503668.1 | hypothetical protein | - |
| EYC56_RS21925 () | 4652507..4654069 | + | 1563 | WP_131085577.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| EYC56_RS21930 () | 4654135..4655256 | - | 1122 | WP_053503666.1 | acyl-CoA desaturase | - |
| EYC56_RS21935 () | 4655266..4656342 | - | 1077 | WP_165480807.1 | ferredoxin reductase | - |
| EYC56_RS21940 () | 4656435..4657082 | + | 648 | WP_014504998.1 | HTH-type transcriptional repressor FabR | - |
| EYC56_RS21945 () | 4657761..4658726 | - | 966 | WP_131085579.1 | IS1595 family transposase ISXo5 | Transposase |
| EYC56_RS24695 () | 4659722..4659886 | - | 165 | WP_024744502.1 | hypothetical protein | - |
| EYC56_RS21960 () | 4660292..4660573 | + | 282 | WP_011257048.1 | hypothetical protein | - |
| EYC56_RS21965 () | 4660617..4660892 | + | 276 | WP_053503289.1 | hypothetical protein | - |
| EYC56_RS21970 () | 4660969..4661562 | + | 594 | WP_024744500.1 | DUF4142 domain-containing protein | - |
| EYC56_RS21975 () | 4661768..4662655 | + | 888 | WP_053503288.1 | TIGR01777 family oxidoreductase | - |
| EYC56_RS21980 () | 4662803..4662895 | + | 93 | Protein_3981 | DNA-binding response regulator | - |
| EYC56_RS21985 () | 4662961..4663287 | + | 327 | WP_053503292.1 | sensor histidine kinase | - |
| EYC56_RS21990 () | 4663739..4664590 | - | 852 | WP_053503287.1 | hypothetical protein | - |
| EYC56_RS21995 () | 4664834..4666270 | + | 1437 | WP_053503286.1 | Periplasmic serine endoprotease DegP | VF |
| EYC56_RS22000 () | 4666387..4666749 | + | 363 | WP_011407225.1 | hypothetical protein | - |
| EYC56_RS22005 () | 4666753..4667238 | + | 486 | WP_131074332.1 | phage holin family protein | - |
| EYC56_RS22010 () | 4667235..4667618 | + | 384 | WP_014505011.1 | hypothetical protein | - |
| EYC56_RS22020 () | 4668245..4669351 | + | 1107 | WP_131085583.1 | AI-2E family transporter | - |
| EYC56_RS22025 () | 4669497..4670234 | + | 738 | WP_131074329.1 | HAD family hydrolase | - |
| EYC56_RS22030 () | 4670275..4671645 | + | 1371 | WP_131082969.1 | leucyl aminopeptidase family protein | - |
| EYC56_RS22035 () | 4671701..4672453 | - | 753 | WP_131085585.1 | anti-sigma factor | - |
| EYC56_RS22040 () | 4672450..4672965 | - | 516 | WP_131078825.1 | RNA polymerase sigma factor | - |
| EYC56_RS22045 () | 4673114..4674205 | + | 1092 | WP_044749703.1 | catalase family peroxidase | - |
| EYC56_RS22050 () | 4674202..4674735 | + | 534 | WP_044749702.1 | cytochrome b | - |
| EYC56_RS22055 () | 4674912..4675197 | + | 286 | Protein_3995 | IS30 family transposase | - |
| EYC56_RS22060 () | 4675430..4676545 | + | 1116 | WP_131085588.1 | alpha/beta hydrolase | - |
| EYC56_RS22065 () | 4676625..4677533 | - | 909 | WP_131085590.1 | EamA family transporter RarD | - |
| EYC56_RS22070 () | 4677530..4678474 | - | 945 | WP_207306618.1 | drug/metabolite exporter YedA | - |
| EYC56_RS22075 () | 4678519..4678971 | + | 453 | WP_131082972.1 | hypothetical protein | - |
| EYC56_RS22085 () | 4679337..4681064 | - | 1728 | WP_131074324.1 | M28 family peptidase | - |
| EYC56_RS22095 () | 4681452..4682474 | - | 1023 | WP_165480808.1 | MBL fold metallo-hydrolase | - |
| EYC56_RS22100 () | 4682527..4683816 | - | 1290 | WP_131085594.1 | tryptophan--tRNA ligase | - |
| EYC56_RS22105 () | 4683985..4684194 | - | 210 | WP_053503274.1 | CsbD family protein | - |
| EYC56_RS22110 () | 4684436..4684570 | - | 135 | WP_011257368.1 | entericidin A/B family lipoprotein | Toxin Detail |
| EYC56_RS22115 () | 4684645..4684797 | - | 153 | WP_011407410.1 | entericidin A/B family lipoprotein | Antitoxin Detail |
| EYC56_RS22120 () | 4684905..4685828 | - | 924 | WP_053503273.1 | arginase | - |
| EYC56_RS22125 () | 4686150..4686814 | + | 665 | Protein_4007 | hypothetical protein | - |
| EYC56_RS22130 () | 4686811..4687353 | + | 543 | WP_131085596.1 | GTPase | - |
| EYC56_RS22140 () | 4687832..4688515 | + | 684 | WP_053503272.1 | dTMP kinase | - |
| EYC56_RS22150 () | 4689316..4690236 | - | 921 | WP_131085598.1 | SPOR domain-containing protein | - |
| EYC56_RS22155 () | 4690246..4690974 | - | 729 | WP_024711519.1 | type III pantothenate kinase | - |
| EYC56_RS22160 () | 4690971..4691987 | - | 1017 | WP_207306619.1 | bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA | - |
| EYC56_RS22165 () | 4692294..4692605 | + | 312 | WP_053503269.1 | hypothetical protein | - |
| EYC56_RS22170 () | 4692614..4693369 | + | 756 | WP_024744469.1 | zinc-dependent peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|